Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC14.33□□□□□ -0.11
LINC01546A6NGU7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LINC01546A6NGU7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LINC01546A6NGU7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LINC01546A6NGU7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01546A6NGU7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01546A6NGU7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
LINC01546A6NGU7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC14.33□□□□□ -0.12
LINC01546A6NGU7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC01546A6NGU7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC01546A6NGU7 KRT125P-201ENST00000546827 989 ntBASIC14.33□□□□□ -0.12
LINC01546A6NGU7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC14.33□□□□□ -0.12
LINC01546A6NGU7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC01546A6NGU7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01546A6NGU7 SYT6-210ENST00000641643 1587 ntBASIC14.33□□□□□ -0.12
LINC01546A6NGU7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC14.33□□□□□ -0.12
LINC01546A6NGU7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01546A6NGU7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
LINC01546A6NGU7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01546A6NGU7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01546A6NGU7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC01546A6NGU7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 KRT8P33-201ENST00000508125 1423 ntBASIC14.32□□□□□ -0.12
LINC01546A6NGU7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01546A6NGU7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 AC009237.14-201ENST00000609975 1594 ntBASIC14.31□□□□□ -0.12
LINC01546A6NGU7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01546A6NGU7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 AC135050.7-201ENST00000624508 2218 ntBASIC14.3□□□□□ -0.12
LINC01546A6NGU7 DPP3P2-201ENST00000416030 1696 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms