Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC22.35■■□□□ 1.17
TRIM49BA6NDI0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.35■■□□□ 1.17
TRIM49BA6NDI0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRIM49BA6NDI0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRIM49BA6NDI0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRIM49BA6NDI0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRIM49BA6NDI0 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.35■■□□□ 1.17
TRIM49BA6NDI0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.35■■□□□ 1.17
TRIM49BA6NDI0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
TRIM49BA6NDI0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
TRIM49BA6NDI0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC22.35■■□□□ 1.17
TRIM49BA6NDI0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.35■■□□□ 1.17
TRIM49BA6NDI0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TRIM49BA6NDI0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC22.35■■□□□ 1.17
TRIM49BA6NDI0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRIM49BA6NDI0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRIM49BA6NDI0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.35■■□□□ 1.17
TRIM49BA6NDI0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
TRIM49BA6NDI0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.34■■□□□ 1.17
TRIM49BA6NDI0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC22.34■■□□□ 1.17
TRIM49BA6NDI0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRIM49BA6NDI0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRIM49BA6NDI0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRIM49BA6NDI0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TRIM49BA6NDI0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC22.34■■□□□ 1.17
TRIM49BA6NDI0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
TRIM49BA6NDI0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.34■■□□□ 1.17
TRIM49BA6NDI0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.34■■□□□ 1.17
TRIM49BA6NDI0 AL591742.1-201ENST00000604433 565 ntBASIC22.34■■□□□ 1.17
TRIM49BA6NDI0 AC011767.1-201ENST00000617410 1153 ntBASIC22.34■■□□□ 1.17
TRIM49BA6NDI0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TRIM49BA6NDI0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.34■■□□□ 1.17
TRIM49BA6NDI0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TRIM49BA6NDI0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
TRIM49BA6NDI0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TRIM49BA6NDI0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC22.34■■□□□ 1.17
TRIM49BA6NDI0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.33■■□□□ 1.17
TRIM49BA6NDI0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
TRIM49BA6NDI0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TRIM49BA6NDI0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.17
TRIM49BA6NDI0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.33■■□□□ 1.17
TRIM49BA6NDI0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
TRIM49BA6NDI0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TRIM49BA6NDI0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TRIM49BA6NDI0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TRIM49BA6NDI0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.33■■□□□ 1.17
TRIM49BA6NDI0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
TRIM49BA6NDI0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC22.33■■□□□ 1.16
TRIM49BA6NDI0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TRIM49BA6NDI0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC22.33■■□□□ 1.16
TRIM49BA6NDI0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TRIM49BA6NDI0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TRIM49BA6NDI0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TRIM49BA6NDI0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
TRIM49BA6NDI0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
TRIM49BA6NDI0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
TRIM49BA6NDI0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TRIM49BA6NDI0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TRIM49BA6NDI0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TRIM49BA6NDI0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRIM49BA6NDI0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRIM49BA6NDI0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.32■■□□□ 1.16
TRIM49BA6NDI0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC22.32■■□□□ 1.16
TRIM49BA6NDI0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.32■■□□□ 1.16
TRIM49BA6NDI0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.32■■□□□ 1.16
TRIM49BA6NDI0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.32■■□□□ 1.16
TRIM49BA6NDI0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TRIM49BA6NDI0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.32■■□□□ 1.16
TRIM49BA6NDI0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRIM49BA6NDI0 CYP21A1P-202ENST00000354927 1481 ntBASIC22.32■■□□□ 1.16
TRIM49BA6NDI0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
TRIM49BA6NDI0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC22.32■■□□□ 1.16
TRIM49BA6NDI0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC22.32■■□□□ 1.16
TRIM49BA6NDI0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRIM49BA6NDI0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.31■■□□□ 1.16
TRIM49BA6NDI0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRIM49BA6NDI0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRIM49BA6NDI0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
TRIM49BA6NDI0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.31■■□□□ 1.16
TRIM49BA6NDI0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRIM49BA6NDI0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.31■■□□□ 1.16
TRIM49BA6NDI0 KRT18P11-201ENST00000435214 1283 ntBASIC22.31■■□□□ 1.16
TRIM49BA6NDI0 CNN2P6-201ENST00000439038 900 ntBASIC22.31■■□□□ 1.16
TRIM49BA6NDI0 AC007322.4-201ENST00000509611 723 ntBASIC22.31■■□□□ 1.16
TRIM49BA6NDI0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.31■■□□□ 1.16
TRIM49BA6NDI0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC22.31■■□□□ 1.16
TRIM49BA6NDI0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.31■■□□□ 1.16
TRIM49BA6NDI0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.31■■□□□ 1.16
TRIM49BA6NDI0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.31■■□□□ 1.16
TRIM49BA6NDI0 AC013268.1-206ENST00000638368 961 ntBASIC22.31■■□□□ 1.16
TRIM49BA6NDI0 AC112229.1-201ENST00000639295 961 ntBASIC22.31■■□□□ 1.16
TRIM49BA6NDI0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRIM49BA6NDI0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.31■■□□□ 1.16
TRIM49BA6NDI0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRIM49BA6NDI0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
TRIM49BA6NDI0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRIM49BA6NDI0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRIM49BA6NDI0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC22.31■■□□□ 1.16
TRIM49BA6NDI0 AC087633.2-202ENST00000565166 1439 ntBASIC22.31■■□□□ 1.16
TRIM49BA6NDI0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms