Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC189A1A4V9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CCDC189A1A4V9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC189A1A4V9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC189A1A4V9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC189A1A4V9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC189A1A4V9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC189A1A4V9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC189A1A4V9 AC020916.1-201ENST00000587762 1774 ntBASIC20.21■□□□□ 0.83
CCDC189A1A4V9 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC189A1A4V9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC189A1A4V9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC189A1A4V9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CCDC189A1A4V9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC189A1A4V9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC189A1A4V9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC189A1A4V9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
CCDC189A1A4V9 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC189A1A4V9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC189A1A4V9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC189A1A4V9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC189A1A4V9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC189A1A4V9 AP001160.3-201ENST00000601484 763 ntBASIC20.2■□□□□ 0.82
CCDC189A1A4V9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC189A1A4V9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC189A1A4V9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC189A1A4V9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CCDC189A1A4V9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC189A1A4V9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC189A1A4V9 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC189A1A4V9 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC189A1A4V9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC189A1A4V9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC189A1A4V9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CCDC189A1A4V9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC189A1A4V9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
CCDC189A1A4V9 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC189A1A4V9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC189A1A4V9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CCDC189A1A4V9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC189A1A4V9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC189A1A4V9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC189A1A4V9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC189A1A4V9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC189A1A4V9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CCDC189A1A4V9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC189A1A4V9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC189A1A4V9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC189A1A4V9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.19■□□□□ 0.82
CCDC189A1A4V9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC189A1A4V9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CCDC189A1A4V9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC189A1A4V9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC189A1A4V9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC189A1A4V9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CCDC189A1A4V9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC189A1A4V9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CCDC189A1A4V9 AC116050.2-201ENST00000612102 1779 ntBASIC20.18■□□□□ 0.82
CCDC189A1A4V9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC189A1A4V9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC189A1A4V9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC189A1A4V9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CCDC189A1A4V9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC189A1A4V9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC189A1A4V9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC189A1A4V9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC189A1A4V9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC189A1A4V9 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC189A1A4V9 AC104187.1-201ENST00000607510 612 ntBASIC20.18■□□□□ 0.82
CCDC189A1A4V9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC189A1A4V9 AFG3L1P-217ENST00000557444 2447 ntBASIC20.18■□□□□ 0.82
CCDC189A1A4V9 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC189A1A4V9 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CCDC189A1A4V9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC189A1A4V9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC189A1A4V9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC189A1A4V9 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC189A1A4V9 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
CCDC189A1A4V9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC189A1A4V9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC189A1A4V9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC189A1A4V9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC189A1A4V9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC189A1A4V9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC189A1A4V9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC189A1A4V9 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC189A1A4V9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
CCDC189A1A4V9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCDC189A1A4V9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC189A1A4V9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
CCDC189A1A4V9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCDC189A1A4V9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC189A1A4V9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.16■□□□□ 0.82
CCDC189A1A4V9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC189A1A4V9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC189A1A4V9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC189A1A4V9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC189A1A4V9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC189A1A4V9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC189A1A4V9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms