Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.39■□□□□ 0.85
TCRBV9S1A1TA0A576 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
TCRBV9S1A1TA0A576 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV9S1A1TA0A576 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
TCRBV9S1A1TA0A576 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV9S1A1TA0A576 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV9S1A1TA0A576 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV9S1A1TA0A576 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV9S1A1TA0A576 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV9S1A1TA0A576 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV9S1A1TA0A576 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV9S1A1TA0A576 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
TCRBV9S1A1TA0A576 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.38■□□□□ 0.85
TCRBV9S1A1TA0A576 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV9S1A1TA0A576 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV9S1A1TA0A576 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV9S1A1TA0A576 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV9S1A1TA0A576 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV9S1A1TA0A576 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV9S1A1TA0A576 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TCRBV9S1A1TA0A576 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.38■□□□□ 0.85
TCRBV9S1A1TA0A576 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV9S1A1TA0A576 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV9S1A1TA0A576 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.38■□□□□ 0.85
TCRBV9S1A1TA0A576 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV9S1A1TA0A576 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV9S1A1TA0A576 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV9S1A1TA0A576 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV9S1A1TA0A576 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.38■□□□□ 0.85
TCRBV9S1A1TA0A576 YBX1P1-201ENST00000445822 960 ntBASIC20.38■□□□□ 0.85
TCRBV9S1A1TA0A576 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.38■□□□□ 0.85
TCRBV9S1A1TA0A576 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.38■□□□□ 0.85
TCRBV9S1A1TA0A576 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.38■□□□□ 0.85
TCRBV9S1A1TA0A576 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TCRBV9S1A1TA0A576 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.38■□□□□ 0.85
TCRBV9S1A1TA0A576 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV9S1A1TA0A576 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV9S1A1TA0A576 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV9S1A1TA0A576 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV9S1A1TA0A576 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV9S1A1TA0A576 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV9S1A1TA0A576 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV9S1A1TA0A576 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV9S1A1TA0A576 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
TCRBV9S1A1TA0A576 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV9S1A1TA0A576 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV9S1A1TA0A576 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV9S1A1TA0A576 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV9S1A1TA0A576 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
TCRBV9S1A1TA0A576 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV9S1A1TA0A576 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TCRBV9S1A1TA0A576 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV9S1A1TA0A576 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.37■□□□□ 0.85
TCRBV9S1A1TA0A576 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV9S1A1TA0A576 AC019069.1-201ENST00000610008 1333 ntBASIC20.37■□□□□ 0.85
TCRBV9S1A1TA0A576 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TCRBV9S1A1TA0A576 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV9S1A1TA0A576 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.37■□□□□ 0.85
TCRBV9S1A1TA0A576 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.37■□□□□ 0.85
TCRBV9S1A1TA0A576 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TCRBV9S1A1TA0A576 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.37■□□□□ 0.85
TCRBV9S1A1TA0A576 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV9S1A1TA0A576 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.37■□□□□ 0.85
TCRBV9S1A1TA0A576 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV9S1A1TA0A576 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.36■□□□□ 0.85
TCRBV9S1A1TA0A576 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.36■□□□□ 0.85
TCRBV9S1A1TA0A576 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TCRBV9S1A1TA0A576 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBV9S1A1TA0A576 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBV9S1A1TA0A576 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBV9S1A1TA0A576 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBV9S1A1TA0A576 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TCRBV9S1A1TA0A576 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.36■□□□□ 0.85
TCRBV9S1A1TA0A576 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBV9S1A1TA0A576 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.36■□□□□ 0.85
TCRBV9S1A1TA0A576 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBV9S1A1TA0A576 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBV9S1A1TA0A576 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBV9S1A1TA0A576 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TCRBV9S1A1TA0A576 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TCRBV9S1A1TA0A576 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TCRBV9S1A1TA0A576 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.36■□□□□ 0.85
TCRBV9S1A1TA0A576 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBV9S1A1TA0A576 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBV9S1A1TA0A576 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TCRBV9S1A1TA0A576 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TCRBV9S1A1TA0A576 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TCRBV9S1A1TA0A576 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.35■□□□□ 0.85
TCRBV9S1A1TA0A576 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.35■□□□□ 0.85
TCRBV9S1A1TA0A576 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TCRBV9S1A1TA0A576 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TCRBV9S1A1TA0A576 AC087289.5-201ENST00000586076 3175 ntBASIC20.35■□□□□ 0.85
TCRBV9S1A1TA0A576 BX119927.1-201ENST00000636596 1552 ntBASIC20.35■□□□□ 0.85
TCRBV9S1A1TA0A576 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
TCRBV9S1A1TA0A576 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TCRBV9S1A1TA0A576 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.35■□□□□ 0.85
TCRBV9S1A1TA0A576 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.35■□□□□ 0.85
TCRBV9S1A1TA0A576 KRT18P14-201ENST00000534205 1250 ntBASIC20.35■□□□□ 0.85
TCRBV9S1A1TA0A576 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.35■□□□□ 0.85
TCRBV9S1A1TA0A576 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms