Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00959A0A1B0GUT2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC00959A0A1B0GUT2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00959A0A1B0GUT2 AC007952.6-201ENST00000573168 2673 ntBASIC13.8□□□□□ -0.2
LINC00959A0A1B0GUT2 AC003957.1-201ENST00000625108 2673 ntBASIC13.8□□□□□ -0.2
LINC00959A0A1B0GUT2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
LINC00959A0A1B0GUT2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00959A0A1B0GUT2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
LINC00959A0A1B0GUT2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC00959A0A1B0GUT2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 AC091799.1-201ENST00000422823 811 ntBASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 AC007322.3-201ENST00000426526 701 ntBASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC13.79□□□□□ -0.2
LINC00959A0A1B0GUT2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 YBX1P1-201ENST00000445822 960 ntBASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 SLC7A5P1-201ENST00000568957 537 ntBASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 FAM21FP-204ENST00000608637 956 ntBASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 KRT8P36-201ENST00000489121 1440 ntBASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 RBM17P2-201ENST00000616397 1405 ntBASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00959A0A1B0GUT2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00959A0A1B0GUT2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00959A0A1B0GUT2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00959A0A1B0GUT2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00959A0A1B0GUT2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
LINC00959A0A1B0GUT2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00959A0A1B0GUT2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
LINC00959A0A1B0GUT2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00959A0A1B0GUT2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00959A0A1B0GUT2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00959A0A1B0GUT2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00959A0A1B0GUT2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00959A0A1B0GUT2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00959A0A1B0GUT2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00959A0A1B0GUT2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00959A0A1B0GUT2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00959A0A1B0GUT2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC13.77□□□□□ -0.21
LINC00959A0A1B0GUT2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC00959A0A1B0GUT2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00959A0A1B0GUT2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
LINC00959A0A1B0GUT2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
LINC00959A0A1B0GUT2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
LINC00959A0A1B0GUT2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00959A0A1B0GUT2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms