Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC13.4□□□□□ -0.27
TRAV13-2A0A0B4J235 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
TRAV13-2A0A0B4J235 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC13.39□□□□□ -0.27
TRAV13-2A0A0B4J235 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-2A0A0B4J235 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-2A0A0B4J235 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-2A0A0B4J235 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-2A0A0B4J235 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
TRAV13-2A0A0B4J235 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV13-2A0A0B4J235 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAV13-2A0A0B4J235 Z92544.1-202ENST00000571933 1220 ntBASIC13.39□□□□□ -0.27
TRAV13-2A0A0B4J235 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC13.39□□□□□ -0.27
TRAV13-2A0A0B4J235 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC13.39□□□□□ -0.27
TRAV13-2A0A0B4J235 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-2A0A0B4J235 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-2A0A0B4J235 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-2A0A0B4J235 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TRAV13-2A0A0B4J235 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-2A0A0B4J235 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV13-2A0A0B4J235 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV13-2A0A0B4J235 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
TRAV13-2A0A0B4J235 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-2A0A0B4J235 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-2A0A0B4J235 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV13-2A0A0B4J235 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRAV13-2A0A0B4J235 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV13-2A0A0B4J235 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-2A0A0B4J235 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-2A0A0B4J235 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-2A0A0B4J235 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
TRAV13-2A0A0B4J235 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TRAV13-2A0A0B4J235 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-2A0A0B4J235 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-2A0A0B4J235 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV13-2A0A0B4J235 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV13-2A0A0B4J235 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-2A0A0B4J235 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV13-2A0A0B4J235 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-2A0A0B4J235 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-2A0A0B4J235 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV13-2A0A0B4J235 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAV13-2A0A0B4J235 AC137630.3-201ENST00000607245 391 ntBASIC13.38□□□□□ -0.27
TRAV13-2A0A0B4J235 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-2A0A0B4J235 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-2A0A0B4J235 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-2A0A0B4J235 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-2A0A0B4J235 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-2A0A0B4J235 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAV13-2A0A0B4J235 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-2A0A0B4J235 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
TRAV13-2A0A0B4J235 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-2A0A0B4J235 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV13-2A0A0B4J235 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-2A0A0B4J235 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV13-2A0A0B4J235 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TRAV13-2A0A0B4J235 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-2A0A0B4J235 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-2A0A0B4J235 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV13-2A0A0B4J235 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-2A0A0B4J235 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-2A0A0B4J235 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-2A0A0B4J235 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRAV13-2A0A0B4J235 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-2A0A0B4J235 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-2A0A0B4J235 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC13.37□□□□□ -0.27
TRAV13-2A0A0B4J235 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV13-2A0A0B4J235 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV13-2A0A0B4J235 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV13-2A0A0B4J235 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-2A0A0B4J235 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-2A0A0B4J235 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-2A0A0B4J235 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-2A0A0B4J235 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-2A0A0B4J235 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-2A0A0B4J235 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-2A0A0B4J235 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
TRAV13-2A0A0B4J235 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV13-2A0A0B4J235 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRAV13-2A0A0B4J235 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV13-2A0A0B4J235 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV13-2A0A0B4J235 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV13-2A0A0B4J235 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
TRAV13-2A0A0B4J235 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV13-2A0A0B4J235 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV13-2A0A0B4J235 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV13-2A0A0B4J235 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV13-2A0A0B4J235 AP006587.3-201ENST00000525742 1516 ntBASIC13.36□□□□□ -0.27
TRAV13-2A0A0B4J235 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRAV13-2A0A0B4J235 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV13-2A0A0B4J235 AL451085.2-201ENST00000605085 799 ntBASIC13.36□□□□□ -0.27
TRAV13-2A0A0B4J235 AC241377.3-202ENST00000626088 1088 ntBASIC13.36□□□□□ -0.27
TRAV13-2A0A0B4J235 AC241585.3-202ENST00000628937 1088 ntBASIC13.36□□□□□ -0.27
TRAV13-2A0A0B4J235 AC245100.8-202ENST00000629247 1058 ntBASIC13.36□□□□□ -0.27
TRAV13-2A0A0B4J235 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRAV13-2A0A0B4J235 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV13-2A0A0B4J235 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV13-2A0A0B4J235 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV13-2A0A0B4J235 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV13-2A0A0B4J235 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV13-2A0A0B4J235 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms