Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV8-1A0A0A6YYK1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-1A0A0A6YYK1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-1A0A0A6YYK1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TRAV8-1A0A0A6YYK1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TRAV8-1A0A0A6YYK1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV8-1A0A0A6YYK1 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-1A0A0A6YYK1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-1A0A0A6YYK1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TRAV8-1A0A0A6YYK1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC15.37■□□□□ 0.05
TRAV8-1A0A0A6YYK1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRAV8-1A0A0A6YYK1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-1A0A0A6YYK1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC15.37■□□□□ 0.05
TRAV8-1A0A0A6YYK1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV8-1A0A0A6YYK1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV8-1A0A0A6YYK1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-1A0A0A6YYK1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TRAV8-1A0A0A6YYK1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV8-1A0A0A6YYK1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-1A0A0A6YYK1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-1A0A0A6YYK1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRAV8-1A0A0A6YYK1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TRAV8-1A0A0A6YYK1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-1A0A0A6YYK1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV8-1A0A0A6YYK1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TRAV8-1A0A0A6YYK1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-1A0A0A6YYK1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-1A0A0A6YYK1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-1A0A0A6YYK1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-1A0A0A6YYK1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRAV8-1A0A0A6YYK1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV8-1A0A0A6YYK1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-1A0A0A6YYK1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV8-1A0A0A6YYK1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-1A0A0A6YYK1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-1A0A0A6YYK1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
TRAV8-1A0A0A6YYK1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV8-1A0A0A6YYK1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-1A0A0A6YYK1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRAV8-1A0A0A6YYK1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-1A0A0A6YYK1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRAV8-1A0A0A6YYK1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC15.35■□□□□ 0.05
TRAV8-1A0A0A6YYK1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-1A0A0A6YYK1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV8-1A0A0A6YYK1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-1A0A0A6YYK1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRAV8-1A0A0A6YYK1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV8-1A0A0A6YYK1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-1A0A0A6YYK1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-1A0A0A6YYK1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-1A0A0A6YYK1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
TRAV8-1A0A0A6YYK1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-1A0A0A6YYK1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-1A0A0A6YYK1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-1A0A0A6YYK1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-1A0A0A6YYK1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-1A0A0A6YYK1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV8-1A0A0A6YYK1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRAV8-1A0A0A6YYK1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
TRAV8-1A0A0A6YYK1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-1A0A0A6YYK1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms