Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 RAB27A-202ENST00000396307 3459 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 ABHD3-205ENST00000578270 2080 ntTSL 5 BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 MSH5-205ENST00000395853 2704 ntTSL 2 BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 TDGF1P3-202ENST00000602699 2710 ntBASIC8.73□□□□□ -1.01
LMO3Q8TAP4 CAMK2D-213ENST00000514328 1497 ntTSL 5 BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 GLYATL2-202ENST00000532258 1488 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 SMG1P1-202ENST00000309865 4223 ntBASIC8.73□□□□□ -1.01
LMO3Q8TAP4 AC117382.2-201ENST00000564748 3151 ntBASIC8.73□□□□□ -1.01
LMO3Q8TAP4 OR11G2-201ENST00000357366 1038 ntBASIC8.73□□□□□ -1.01
LMO3Q8TAP4 AC234778.1-201ENST00000399253 370 ntBASIC8.73□□□□□ -1.01
LMO3Q8TAP4 RNA5SP265-201ENST00000411023 111 ntBASIC8.73□□□□□ -1.01
LMO3Q8TAP4 AC003986.3-201ENST00000417460 692 ntTSL 3 BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 LINC00851-201ENST00000423033 727 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 SOX9-AS1-203ENST00000424417 576 ntTSL 4 BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 FANK1-AS1-201ENST00000445458 428 ntTSL 3 BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 PTP4A2-201ENST00000457805 1032 ntTSL 2 BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 RPS6P25-201ENST00000464444 748 ntBASIC8.73□□□□□ -1.01
LMO3Q8TAP4 AC093010.2-201ENST00000481773 743 ntTSL 3 BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 AC138123.3-201ENST00000551928 791 ntTSL 5 BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 AC004241.1-203ENST00000552502 460 ntTSL 3 BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 AC026401.2-201ENST00000576454 503 ntTSL 3 BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 RN7SL113P-201ENST00000619959 299 ntBASIC8.73□□□□□ -1.01
LMO3Q8TAP4 OR5G5P-204ENST00000627642 621 ntBASIC8.73□□□□□ -1.01
LMO3Q8TAP4 GLI1-201ENST00000228682 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 METTL7A-203ENST00000548553 4076 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 AC007638.2-201ENST00000574716 1740 ntTSL 2 BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 SUN3-202ENST00000395572 1348 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 AL512604.2-201ENST00000426946 1314 ntTSL 5 BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 AL049776.1-201ENST00000624600 2025 ntBASIC8.73□□□□□ -1.01
LMO3Q8TAP4 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 AL591848.3-201ENST00000570141 2968 ntBASIC8.73□□□□□ -1.01
LMO3Q8TAP4 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC8.73□□□□□ -1.01
LMO3Q8TAP4 AC110998.1-201ENST00000519029 2053 ntBASIC8.73□□□□□ -1.01
LMO3Q8TAP4 CHD6-201ENST00000309279 1635 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 DMBT1-203ENST00000344338 7656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 DMBT1-205ENST00000368955 7656 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 GABRP-203ENST00000518525 3576 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 DHRS9-202ENST00000412271 1465 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 MITF-202ENST00000314589 1993 ntTSL 2 BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 SERPINB12-201ENST00000269491 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 SMCO2-201ENST00000298876 1122 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 RN7SKP208-201ENST00000365474 361 ntBASIC8.72□□□□□ -1.01
LMO3Q8TAP4 MRPL55-211ENST00000366738 705 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 TMEM244-201ENST00000368143 545 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 TRAJ24-201ENST00000390513 63 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 AC005999.1-201ENST00000414409 588 ntTSL 4 BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 SMCO2-202ENST00000416383 1272 ntAPPRIS P2 TSL 5 BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 LINC00853-201ENST00000429328 661 ntTSL 2 BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 MRLN-202ENST00000430431 495 ntAPPRIS P2 TSL 2 BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 OR2AI1P-201ENST00000448534 932 ntBASIC8.72□□□□□ -1.01
LMO3Q8TAP4 AL451074.1-202ENST00000453762 989 ntBASIC8.72□□□□□ -1.01
LMO3Q8TAP4 AC092569.1-201ENST00000455192 258 ntBASIC8.72□□□□□ -1.01
LMO3Q8TAP4 AC017002.3-201ENST00000455309 757 ntTSL 2 BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 AC008799.1-201ENST00000495909 457 ntBASIC8.72□□□□□ -1.01
LMO3Q8TAP4 AC108073.1-201ENST00000508231 674 ntBASIC8.72□□□□□ -1.01
LMO3Q8TAP4 C14orf159-210ENST00000518665 959 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 PPP1R1AP1-201ENST00000525622 425 ntBASIC8.72□□□□□ -1.01
LMO3Q8TAP4 OR4A9P-201ENST00000526326 944 ntBASIC8.72□□□□□ -1.01
LMO3Q8TAP4 DHX8-202ENST00000540306 3809 ntTSL 2 BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 LINC02455-201ENST00000541881 496 ntTSL 3 BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 AC087241.3-201ENST00000542076 862 ntTSL 2 BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 AC010542.3-202ENST00000561728 701 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 AC003956.1-201ENST00000598450 356 ntTSL 3 BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 AC245041.1-201ENST00000619523 826 ntTSL 3 BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 MIR6834-201ENST00000622807 81 ntBASIC8.72□□□□□ -1.01
LMO3Q8TAP4 LINC01358-208ENST00000634569 1030 ntTSL 5 BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 AL356289.1-201ENST00000635446 743 ntTSL 3 BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 BTK-201ENST00000308731 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 HM13-224ENST00000498035 3932 ntTSL 2 BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 FCGR3B-204ENST00000531221 1339 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 ABCF2P1-201ENST00000465687 1867 ntBASIC8.72□□□□□ -1.01
LMO3Q8TAP4 ADCY10P1-203ENST00000567255 4569 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 DNAJC5B-201ENST00000276570 1382 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 LHX9-203ENST00000367390 7413 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 CLCN3P1-202ENST00000609203 1944 ntTSL 2 BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 DCAF6-202ENST00000367840 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 SERPINA1-206ENST00000437397 3340 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
LMO3Q8TAP4 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
LMO3Q8TAP4 LINC02071-201ENST00000514726 1723 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
LMO3Q8TAP4 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC8.71□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms