Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC110998.1-201ENST00000519029 2053 ntBASIC8.63□□□□□ -1.03
SLC1A1P43005 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
SLC1A1P43005 ZNF655-213ENST00000425063 4624 ntTSL 3 BASIC8.63□□□□□ -1.03
SLC1A1P43005 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC8.63□□□□□ -1.03
SLC1A1P43005 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC8.63□□□□□ -1.03
SLC1A1P43005 SHC4-203ENST00000537958 1447 ntTSL 2 BASIC8.63□□□□□ -1.03
SLC1A1P43005 Z97832.2-201ENST00000605896 4261 ntBASIC8.63□□□□□ -1.03
SLC1A1P43005 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SLC1A1P43005 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
SLC1A1P43005 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
SLC1A1P43005 NVL-212ENST00000469968 2510 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
SLC1A1P43005 ANXA2-202ENST00000396024 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SLC1A1P43005 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SLC1A1P43005 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SLC1A1P43005 CDC42SE2-208ENST00000505065 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SLC1A1P43005 IL24-207ENST00000611909 1621 ntTSL 3 BASIC8.62□□□□□ -1.03
SLC1A1P43005 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SLC1A1P43005 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
SLC1A1P43005 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SLC1A1P43005 ANKRD27-201ENST00000306065 4450 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SLC1A1P43005 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SLC1A1P43005 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
SLC1A1P43005 FBXO36-201ENST00000283946 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SLC1A1P43005 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SLC1A1P43005 FAM209B-201ENST00000371325 694 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SLC1A1P43005 PROX1-AS1-201ENST00000413560 496 ntTSL 5 BASIC8.62□□□□□ -1.03
SLC1A1P43005 AC002480.1-201ENST00000442252 1282 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SLC1A1P43005 MT1G-202ENST00000444837 406 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
SLC1A1P43005 AC073254.1-202ENST00000447488 640 ntTSL 3 BASIC8.62□□□□□ -1.03
SLC1A1P43005 MYL5-205ENST00000505477 584 ntTSL 3 BASIC8.62□□□□□ -1.03
SLC1A1P43005 AC093297.2-202ENST00000514597 659 ntTSL 3 BASIC8.62□□□□□ -1.03
SLC1A1P43005 RN7SKP52-201ENST00000516219 250 ntBASIC8.62□□□□□ -1.03
SLC1A1P43005 IGLV7-35-201ENST00000523314 340 ntBASIC8.62□□□□□ -1.03
SLC1A1P43005 AC109635.2-201ENST00000525654 524 ntTSL 3 BASIC8.62□□□□□ -1.03
SLC1A1P43005 FTH1-207ENST00000532601 742 ntTSL 3 BASIC8.62□□□□□ -1.03
SLC1A1P43005 WARSP1-201ENST00000533936 454 ntBASIC8.62□□□□□ -1.03
SLC1A1P43005 AC069235.1-202ENST00000545535 540 ntTSL 3 BASIC8.62□□□□□ -1.03
SLC1A1P43005 AL357153.2-201ENST00000556646 565 ntTSL 4 BASIC8.62□□□□□ -1.03
SLC1A1P43005 AL023284.4-201ENST00000564248 374 ntBASIC8.62□□□□□ -1.03
SLC1A1P43005 AC139085.1-201ENST00000582716 182 ntBASIC8.62□□□□□ -1.03
SLC1A1P43005 TREM1-204ENST00000589614 772 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
SLC1A1P43005 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC8.62□□□□□ -1.03
SLC1A1P43005 ZNF283-205ENST00000590950 466 ntTSL 5 BASIC8.62□□□□□ -1.03
SLC1A1P43005 AC100843.3-201ENST00000591796 259 ntBASIC8.62□□□□□ -1.03
SLC1A1P43005 PROX1-AS1-208ENST00000601335 691 ntTSL 5 BASIC8.62□□□□□ -1.03
SLC1A1P43005 AC018926.2-201ENST00000611214 498 ntBASIC8.62□□□□□ -1.03
SLC1A1P43005 ZNF365-211ENST00000614806 877 ntTSL 5 BASIC8.62□□□□□ -1.03
SLC1A1P43005 Metazoa_SRP.136-201ENST00000614846 283 ntBASIC8.62□□□□□ -1.03
SLC1A1P43005 AL589666.2-201ENST00000624603 618 ntBASIC8.62□□□□□ -1.03
SLC1A1P43005 LINC01778-208ENST00000635288 1095 ntTSL 5 BASIC8.62□□□□□ -1.03
SLC1A1P43005 snoMe28S-Am2634.2-201ENST00000637869 80 ntBASIC8.62□□□□□ -1.03
SLC1A1P43005 LRP4-AS1-201ENST00000502049 1504 ntTSL 2 BASIC8.62□□□□□ -1.03
SLC1A1P43005 KDELC1P1-201ENST00000512118 1509 ntBASIC8.62□□□□□ -1.03
SLC1A1P43005 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC8.62□□□□□ -1.03
SLC1A1P43005 LINC01568-201ENST00000554640 2544 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SLC1A1P43005 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SLC1A1P43005 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
SLC1A1P43005 GLYAT-202ENST00000344743 1735 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SLC1A1P43005 C4orf26-205ENST00000616557 1725 ntTSL 3 BASIC8.62□□□□□ -1.03
SLC1A1P43005 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
SLC1A1P43005 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SLC1A1P43005 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SLC1A1P43005 IKZF3-205ENST00000350532 1413 ntTSL 5 BASIC8.62□□□□□ -1.03
SLC1A1P43005 IKZF3-206ENST00000351680 1413 ntTSL 5 BASIC8.62□□□□□ -1.03
SLC1A1P43005 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SLC1A1P43005 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC8.62□□□□□ -1.03
SLC1A1P43005 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
SLC1A1P43005 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SLC1A1P43005 WBP2NL-201ENST00000328823 2255 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
SLC1A1P43005 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
SLC1A1P43005 AL390195.2-201ENST00000564771 2023 ntBASIC8.61□□□□□ -1.03
SLC1A1P43005 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC8.61□□□□□ -1.03
SLC1A1P43005 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
SLC1A1P43005 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SLC1A1P43005 C4BPB-201ENST00000243611 1117 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
SLC1A1P43005 AIG1-201ENST00000275235 1202 ntTSL 2 BASIC8.61□□□□□ -1.03
SLC1A1P43005 OR2D3-201ENST00000317834 1070 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
SLC1A1P43005 CDC25C-201ENST00000323760 2128 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SLC1A1P43005 FAM107B-202ENST00000378458 1284 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
SLC1A1P43005 MT-TS1-201ENST00000387416 69 ntBASIC8.61□□□□□ -1.03
SLC1A1P43005 DSCR4-202ENST00000398948 777 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
SLC1A1P43005 AL031229.1-201ENST00000404273 224 ntBASIC8.61□□□□□ -1.03
SLC1A1P43005 AL356432.2-201ENST00000407841 422 ntBASIC8.61□□□□□ -1.03
SLC1A1P43005 AC064862.3-201ENST00000411435 571 ntBASIC8.61□□□□□ -1.03
SLC1A1P43005 OR9I2P-201ENST00000427941 903 ntBASIC8.61□□□□□ -1.03
SLC1A1P43005 AC132217.1-201ENST00000430034 373 ntTSL 3 BASIC8.61□□□□□ -1.03
SLC1A1P43005 AC009228.1-203ENST00000430105 432 ntTSL 3 BASIC8.61□□□□□ -1.03
SLC1A1P43005 AC007683.1-201ENST00000432746 591 ntBASIC8.61□□□□□ -1.03
SLC1A1P43005 LINC01422-202ENST00000438113 517 ntTSL 5 BASIC8.61□□□□□ -1.03
SLC1A1P43005 AC012454.1-201ENST00000443948 995 ntBASIC8.61□□□□□ -1.03
SLC1A1P43005 AL663058.1-201ENST00000453379 353 ntBASIC8.61□□□□□ -1.03
SLC1A1P43005 AC125618.1-201ENST00000472596 563 ntTSL 4 BASIC8.61□□□□□ -1.03
SLC1A1P43005 RNF7P1-201ENST00000478598 342 ntBASIC8.61□□□□□ -1.03
SLC1A1P43005 RN7SL236P-201ENST00000484759 284 ntBASIC8.61□□□□□ -1.03
SLC1A1P43005 EGFLAM-AS1-201ENST00000508986 331 ntTSL 3 BASIC8.61□□□□□ -1.03
SLC1A1P43005 AC068134.3-201ENST00000513620 788 ntBASIC8.61□□□□□ -1.03
SLC1A1P43005 MIR2052HG-204ENST00000523442 550 ntTSL 4 BASIC8.61□□□□□ -1.03
SLC1A1P43005 AC104031.1-201ENST00000527726 372 ntTSL 2 BASIC8.61□□□□□ -1.03
SLC1A1P43005 LINC01499-201ENST00000528720 553 ntTSL 4 BASIC8.61□□□□□ -1.03
SLC1A1P43005 AP000879.2-201ENST00000530525 497 ntTSL 3 BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms