Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 WDPCP-206ENST00000409562 3544 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 ZNF611-203ENST00000540744 4417 ntAPPRIS P1 TSL 4 BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 AC113189.6-201ENST00000636696 3591 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 LRRC37A9P-201ENST00000603850 5376 ntBASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 FRMD6-201ENST00000344768 2972 ntTSL 2 BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 GIN1-201ENST00000399004 3229 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 C2orf42-205ENST00000420306 2193 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 KIF23-202ENST00000352331 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 RBM26-AS1-202ENST00000606049 2427 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 HMGCLL1-201ENST00000274901 2475 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 MAPK10-301ENST00000641313 2482 ntBASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 RACK1-201ENST00000376817 965 ntTSL 5 BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 AC084880.1-201ENST00000392530 545 ntBASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 AL032822.1-201ENST00000405827 1063 ntBASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 TMSB10P1-201ENST00000415070 132 ntBASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 AC114760.1-201ENST00000420310 652 ntBASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 AC098617.1-202ENST00000428980 1207 ntTSL 5 BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 CDH13-203ENST00000431540 831 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 AL138957.1-201ENST00000435156 342 ntTSL 3 BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 RPL37A-204ENST00000441179 529 ntTSL 5 BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 LINC01937-201ENST00000448543 553 ntTSL 4 BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 RPL21P92-201ENST00000454107 476 ntBASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 LINC01948-201ENST00000506836 656 ntTSL 2 BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 AC060765.1-202ENST00000518367 257 ntTSL 3 BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 IGLV7-35-201ENST00000523314 340 ntBASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 AC083841.1-201ENST00000523657 670 ntTSL 2 BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 MRVI1-AS1-201ENST00000525578 829 ntTSL 3 BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 C11orf70-202ENST00000526781 845 ntTSL 3 BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 AC027013.1-201ENST00000554412 1057 ntTSL 2 BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 AC110027.1-201ENST00000557753 403 ntBASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 CDH13-207ENST00000565636 810 ntTSL 5 BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 JPT1-211ENST00000581874 517 ntTSL 5 BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 AC021382.2-201ENST00000584547 922 ntTSL 3 BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 FAM74A6-203ENST00000615956 481 ntBASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 AC243654.1-201ENST00000620218 293 ntTSL 2 BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 AC068205.4-201ENST00000637880 804 ntBASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 OR8B9P-202ENST00000642028 5216 ntBASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 ZNF143-204ENST00000396604 2696 ntAPPRIS ALT1 TSL 5 BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 KEL-201ENST00000355265 2812 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 AL049842.1-201ENST00000402902 1479 ntBASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 ASB15-205ENST00000451215 2956 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 INHBA-AS1-201ENST00000415848 3005 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 LINC00955-202ENST00000514422 1502 ntTSL 4 BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 AC114980.1-201ENST00000505668 3157 ntBASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 TMEM97-202ENST00000336687 2115 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 INTS7-201ENST00000366992 3380 ntTSL 2 BASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 TMPRSS4-219ENST00000616579 3417 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 Y_RNA.209-201ENST00000364156 111 ntBASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 SORCS1-203ENST00000369698 2638 ntTSL 5 BASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 TPP2-202ENST00000376065 3931 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 MIR185-201ENST00000385288 82 ntBASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 PRCP-202ENST00000393399 2120 ntTSL 2 BASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 FBXW11P1-201ENST00000393804 1474 ntBASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 GPN1-202ENST00000407583 1395 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 AC004009.1-201ENST00000412413 567 ntTSL 5 BASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 TRIM48-201ENST00000417545 1445 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 AL513523.1-201ENST00000417868 1309 ntBASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 AC092066.1-201ENST00000425131 317 ntBASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 GTF2IP7-201ENST00000434037 2399 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 ITM2A-202ENST00000434584 1698 ntTSL 2 BASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 MUC20-204ENST00000445522 2842 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 LMNTD1-203ENST00000445693 1285 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 AC092634.4-203ENST00000451395 448 ntBASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 AL353194.1-201ENST00000451507 441 ntTSL 2 BASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 AL365436.1-201ENST00000452587 495 ntBASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 PPIAP28-201ENST00000458378 485 ntBASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 RN7SL395P-201ENST00000462960 291 ntBASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 AC022415.1-201ENST00000472362 1517 ntBASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 LINC00678-201ENST00000527083 786 ntTSL 3 BASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 AP003499.1-201ENST00000527217 574 ntBASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 AC027779.1-201ENST00000530492 516 ntTSL 3 BASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 FAH-204ENST00000539156 3427 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 AL662884.1-201ENST00000559458 662 ntTSL 2 BASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 AC099508.2-201ENST00000563098 510 ntTSL 3 BASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 AC091180.5-201ENST00000576461 382 ntTSL 5 BASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 AC009630.2-202ENST00000578500 884 ntTSL 3 BASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 NF1P1-201ENST00000604105 2645 ntBASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 AC010680.5-201ENST00000605021 463 ntBASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 AC239859.6-201ENST00000622095 213 ntBASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 AC048380.3-201ENST00000623145 796 ntBASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 SOX9-AS1-217ENST00000623935 1563 ntTSL 5 BASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 SCYL2-211ENST00000635101 3948 ntTSL 5 BASIC7.65□□□□□ -1.18
NPIPA3F8WFD2 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms