Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 LINC01960-201ENST00000563759 1884 ntBASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 AC093484.2-201ENST00000580996 2166 ntBASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01558Q9Y6Z2 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 FST-202ENST00000396947 2538 ntTSL 5 BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 EML3-216ENST00000529309 2909 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 LINC01126-201ENST00000623515 1646 ntBASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
LINC01558Q9Y6Z2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 AL022069.1-201ENST00000568025 1636 ntBASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 AC009113.1-201ENST00000570267 2443 ntBASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 SIRPAP1-201ENST00000448467 1770 ntBASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC01558Q9Y6Z2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 AC007225.1-201ENST00000566331 1836 ntBASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
LINC01558Q9Y6Z2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms