Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 AL355802.2-201ENST00000402069 882 ntBASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 BX276092.2-201ENST00000417668 665 ntBASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 PGM5P4-201ENST00000421970 445 ntBASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 GUSBP6-202ENST00000438529 1198 ntBASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.14■□□□□ 0.66
CLCA3PQ9Y6N3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLCA3PQ9Y6N3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.14■□□□□ 0.66
CLCA3PQ9Y6N3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCA3PQ9Y6N3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCA3PQ9Y6N3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
CLCA3PQ9Y6N3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCA3PQ9Y6N3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCA3PQ9Y6N3 MIPEPP3-201ENST00000412105 444 ntBASIC19.14■□□□□ 0.65
CLCA3PQ9Y6N3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCA3PQ9Y6N3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLCA3PQ9Y6N3 CYP21A1P-202ENST00000354927 1481 ntBASIC19.14■□□□□ 0.65
CLCA3PQ9Y6N3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CLCA3PQ9Y6N3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CLCA3PQ9Y6N3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCA3PQ9Y6N3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLCA3PQ9Y6N3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLCA3PQ9Y6N3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCA3PQ9Y6N3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCA3PQ9Y6N3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CLCA3PQ9Y6N3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CLCA3PQ9Y6N3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.13■□□□□ 0.65
CLCA3PQ9Y6N3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLCA3PQ9Y6N3 LSM12P1-201ENST00000411836 588 ntBASIC19.13■□□□□ 0.65
CLCA3PQ9Y6N3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.13■□□□□ 0.65
CLCA3PQ9Y6N3 MIR4758-201ENST00000577688 71 ntBASIC19.13■□□□□ 0.65
CLCA3PQ9Y6N3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
CLCA3PQ9Y6N3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.13■□□□□ 0.65
CLCA3PQ9Y6N3 CYP2T3P-201ENST00000601990 817 ntBASIC19.13■□□□□ 0.65
CLCA3PQ9Y6N3 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.13■□□□□ 0.65
CLCA3PQ9Y6N3 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.13■□□□□ 0.65
CLCA3PQ9Y6N3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.13■□□□□ 0.65
CLCA3PQ9Y6N3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CLCA3PQ9Y6N3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCA3PQ9Y6N3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLCA3PQ9Y6N3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
CLCA3PQ9Y6N3 PLK5-205ENST00000642079 1969 ntBASIC19.13■□□□□ 0.65
CLCA3PQ9Y6N3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.13■□□□□ 0.65
CLCA3PQ9Y6N3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCA3PQ9Y6N3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CLCA3PQ9Y6N3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CLCA3PQ9Y6N3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.13■□□□□ 0.65
CLCA3PQ9Y6N3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCA3PQ9Y6N3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CLCA3PQ9Y6N3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLCA3PQ9Y6N3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.12■□□□□ 0.65
CLCA3PQ9Y6N3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.12■□□□□ 0.65
CLCA3PQ9Y6N3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CLCA3PQ9Y6N3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.12■□□□□ 0.65
CLCA3PQ9Y6N3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCA3PQ9Y6N3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.12■□□□□ 0.65
CLCA3PQ9Y6N3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCA3PQ9Y6N3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCA3PQ9Y6N3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLCA3PQ9Y6N3 KRT18P68-201ENST00000392293 1000 ntBASIC19.12■□□□□ 0.65
CLCA3PQ9Y6N3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCA3PQ9Y6N3 AL355472.2-201ENST00000422958 438 ntBASIC19.12■□□□□ 0.65
CLCA3PQ9Y6N3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.12■□□□□ 0.65
CLCA3PQ9Y6N3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.12■□□□□ 0.65
CLCA3PQ9Y6N3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.12■□□□□ 0.65
CLCA3PQ9Y6N3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.12■□□□□ 0.65
CLCA3PQ9Y6N3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
CLCA3PQ9Y6N3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCA3PQ9Y6N3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CLCA3PQ9Y6N3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCA3PQ9Y6N3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCA3PQ9Y6N3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CLCA3PQ9Y6N3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CLCA3PQ9Y6N3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CLCA3PQ9Y6N3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLCA3PQ9Y6N3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLCA3PQ9Y6N3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.11■□□□□ 0.65
CLCA3PQ9Y6N3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.11■□□□□ 0.65
CLCA3PQ9Y6N3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms