Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLIC4Q9Y696 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLIC4Q9Y696 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLIC4Q9Y696 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CLIC4Q9Y696 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC23.2■■□□□ 1.3
CLIC4Q9Y696 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.2■■□□□ 1.3
CLIC4Q9Y696 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.2■■□□□ 1.3
CLIC4Q9Y696 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.2■■□□□ 1.3
CLIC4Q9Y696 AC016405.3-201ENST00000607710 860 ntBASIC23.2■■□□□ 1.3
CLIC4Q9Y696 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLIC4Q9Y696 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLIC4Q9Y696 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CLIC4Q9Y696 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLIC4Q9Y696 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLIC4Q9Y696 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.19■■□□□ 1.3
CLIC4Q9Y696 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLIC4Q9Y696 AC137761.2-201ENST00000561729 223 ntBASIC23.19■■□□□ 1.3
CLIC4Q9Y696 AC145350.3-201ENST00000569033 163 ntBASIC23.19■■□□□ 1.3
CLIC4Q9Y696 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
CLIC4Q9Y696 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CLIC4Q9Y696 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CLIC4Q9Y696 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC23.19■■□□□ 1.3
CLIC4Q9Y696 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLIC4Q9Y696 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC23.19■■□□□ 1.3
CLIC4Q9Y696 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLIC4Q9Y696 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLIC4Q9Y696 DPP3P2-201ENST00000416030 1696 ntBASIC23.19■■□□□ 1.3
CLIC4Q9Y696 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC23.19■■□□□ 1.3
CLIC4Q9Y696 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC23.19■■□□□ 1.3
CLIC4Q9Y696 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLIC4Q9Y696 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CLIC4Q9Y696 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLIC4Q9Y696 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLIC4Q9Y696 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CLIC4Q9Y696 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.18■■□□□ 1.3
CLIC4Q9Y696 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.18■■□□□ 1.3
CLIC4Q9Y696 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC23.18■■□□□ 1.3
CLIC4Q9Y696 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLIC4Q9Y696 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.18■■□□□ 1.3
CLIC4Q9Y696 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.18■■□□□ 1.3
CLIC4Q9Y696 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.18■■□□□ 1.3
CLIC4Q9Y696 MFSD11-216ENST00000590393 1141 ntBASIC23.18■■□□□ 1.3
CLIC4Q9Y696 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.18■■□□□ 1.3
CLIC4Q9Y696 AL591742.1-201ENST00000604433 565 ntBASIC23.18■■□□□ 1.3
CLIC4Q9Y696 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC23.18■■□□□ 1.3
CLIC4Q9Y696 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC23.18■■□□□ 1.3
CLIC4Q9Y696 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.18■■□□□ 1.3
CLIC4Q9Y696 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CLIC4Q9Y696 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC23.18■■□□□ 1.3
CLIC4Q9Y696 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
CLIC4Q9Y696 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLIC4Q9Y696 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLIC4Q9Y696 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CLIC4Q9Y696 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23.17■■□□□ 1.3
CLIC4Q9Y696 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLIC4Q9Y696 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLIC4Q9Y696 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLIC4Q9Y696 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.17■■□□□ 1.3
CLIC4Q9Y696 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.17■■□□□ 1.3
CLIC4Q9Y696 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CLIC4Q9Y696 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC23.17■■□□□ 1.3
CLIC4Q9Y696 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLIC4Q9Y696 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.17■■□□□ 1.3
CLIC4Q9Y696 RARRES2P6-201ENST00000567333 442 ntBASIC23.17■■□□□ 1.3
CLIC4Q9Y696 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
CLIC4Q9Y696 FAM21FP-204ENST00000608637 956 ntBASIC23.17■■□□□ 1.3
CLIC4Q9Y696 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CLIC4Q9Y696 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CLIC4Q9Y696 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.17■■□□□ 1.3
CLIC4Q9Y696 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.16■■□□□ 1.3
CLIC4Q9Y696 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CLIC4Q9Y696 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
CLIC4Q9Y696 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC23.16■■□□□ 1.3
CLIC4Q9Y696 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC23.16■■□□□ 1.3
CLIC4Q9Y696 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLIC4Q9Y696 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
CLIC4Q9Y696 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC23.16■■□□□ 1.3
CLIC4Q9Y696 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLIC4Q9Y696 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.16■■□□□ 1.3
CLIC4Q9Y696 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.16■■□□□ 1.3
CLIC4Q9Y696 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.16■■□□□ 1.3
CLIC4Q9Y696 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23.16■■□□□ 1.3
CLIC4Q9Y696 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CLIC4Q9Y696 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CLIC4Q9Y696 AC011767.1-201ENST00000617410 1153 ntBASIC23.16■■□□□ 1.3
CLIC4Q9Y696 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.16■■□□□ 1.3
CLIC4Q9Y696 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLIC4Q9Y696 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CLIC4Q9Y696 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLIC4Q9Y696 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLIC4Q9Y696 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLIC4Q9Y696 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLIC4Q9Y696 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CLIC4Q9Y696 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CLIC4Q9Y696 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC23.15■■□□□ 1.3
CLIC4Q9Y696 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CLIC4Q9Y696 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLIC4Q9Y696 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC23.15■■□□□ 1.3
CLIC4Q9Y696 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLIC4Q9Y696 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms