Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAI2Q9Y5P3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAI2Q9Y5P3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAI2Q9Y5P3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RAI2Q9Y5P3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAI2Q9Y5P3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAI2Q9Y5P3 KRT18P29-201ENST00000397031 1267 ntBASIC20.55■□□□□ 0.88
RAI2Q9Y5P3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.55■□□□□ 0.88
RAI2Q9Y5P3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.55■□□□□ 0.88
RAI2Q9Y5P3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RAI2Q9Y5P3 ITM2C-210ENST00000620962 501 ntBASIC20.55■□□□□ 0.88
RAI2Q9Y5P3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAI2Q9Y5P3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAI2Q9Y5P3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAI2Q9Y5P3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAI2Q9Y5P3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAI2Q9Y5P3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAI2Q9Y5P3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAI2Q9Y5P3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.54■□□□□ 0.88
RAI2Q9Y5P3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAI2Q9Y5P3 AC098934.4-201ENST00000564127 592 ntBASIC20.54■□□□□ 0.88
RAI2Q9Y5P3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RAI2Q9Y5P3 AC133041.1-202ENST00000642053 222 ntBASIC20.54■□□□□ 0.88
RAI2Q9Y5P3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RAI2Q9Y5P3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAI2Q9Y5P3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAI2Q9Y5P3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAI2Q9Y5P3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAI2Q9Y5P3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAI2Q9Y5P3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAI2Q9Y5P3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.53■□□□□ 0.88
RAI2Q9Y5P3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RAI2Q9Y5P3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAI2Q9Y5P3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAI2Q9Y5P3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RAI2Q9Y5P3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAI2Q9Y5P3 PRORSD1P-201ENST00000295112 541 ntBASIC20.53■□□□□ 0.88
RAI2Q9Y5P3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RAI2Q9Y5P3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAI2Q9Y5P3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.53■□□□□ 0.88
RAI2Q9Y5P3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.53■□□□□ 0.88
RAI2Q9Y5P3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAI2Q9Y5P3 AC092118.2-201ENST00000613495 667 ntBASIC20.53■□□□□ 0.88
RAI2Q9Y5P3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAI2Q9Y5P3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.53■□□□□ 0.88
RAI2Q9Y5P3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAI2Q9Y5P3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAI2Q9Y5P3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAI2Q9Y5P3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAI2Q9Y5P3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAI2Q9Y5P3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAI2Q9Y5P3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.53■□□□□ 0.88
RAI2Q9Y5P3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAI2Q9Y5P3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAI2Q9Y5P3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RAI2Q9Y5P3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAI2Q9Y5P3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.52■□□□□ 0.88
RAI2Q9Y5P3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAI2Q9Y5P3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAI2Q9Y5P3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAI2Q9Y5P3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.52■□□□□ 0.88
RAI2Q9Y5P3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAI2Q9Y5P3 MIR4758-201ENST00000577688 71 ntBASIC20.52■□□□□ 0.88
RAI2Q9Y5P3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RAI2Q9Y5P3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAI2Q9Y5P3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RAI2Q9Y5P3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RAI2Q9Y5P3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RAI2Q9Y5P3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RAI2Q9Y5P3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.52■□□□□ 0.87
RAI2Q9Y5P3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RAI2Q9Y5P3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAI2Q9Y5P3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RAI2Q9Y5P3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RAI2Q9Y5P3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAI2Q9Y5P3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAI2Q9Y5P3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.51■□□□□ 0.87
RAI2Q9Y5P3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RAI2Q9Y5P3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RAI2Q9Y5P3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
RAI2Q9Y5P3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.51■□□□□ 0.87
RAI2Q9Y5P3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAI2Q9Y5P3 RPS2P52-201ENST00000469610 820 ntBASIC20.51■□□□□ 0.87
RAI2Q9Y5P3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.51■□□□□ 0.87
RAI2Q9Y5P3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.51■□□□□ 0.87
RAI2Q9Y5P3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAI2Q9Y5P3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RAI2Q9Y5P3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAI2Q9Y5P3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.51■□□□□ 0.87
RAI2Q9Y5P3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAI2Q9Y5P3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.5■□□□□ 0.87
RAI2Q9Y5P3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RAI2Q9Y5P3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.5■□□□□ 0.87
RAI2Q9Y5P3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAI2Q9Y5P3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RAI2Q9Y5P3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RAI2Q9Y5P3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.5■□□□□ 0.87
RAI2Q9Y5P3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAI2Q9Y5P3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAI2Q9Y5P3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms