Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.59■□□□□ 0.73
PCDHGA1Q9Y5H4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHGA1Q9Y5H4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA1Q9Y5H4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA1Q9Y5H4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
PCDHGA1Q9Y5H4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGA1Q9Y5H4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.58■□□□□ 0.73
PCDHGA1Q9Y5H4 C9orf163-202ENST00000624034 2573 ntBASIC19.58■□□□□ 0.73
PCDHGA1Q9Y5H4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGA1Q9Y5H4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
PCDHGA1Q9Y5H4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGA1Q9Y5H4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.58■□□□□ 0.72
PCDHGA1Q9Y5H4 KRT16P5-201ENST00000455284 522 ntBASIC19.58■□□□□ 0.72
PCDHGA1Q9Y5H4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA1Q9Y5H4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.58■□□□□ 0.72
PCDHGA1Q9Y5H4 AF186192.3-201ENST00000583427 947 ntBASIC19.58■□□□□ 0.72
PCDHGA1Q9Y5H4 AL445228.2-201ENST00000605589 952 ntBASIC19.58■□□□□ 0.72
PCDHGA1Q9Y5H4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA1Q9Y5H4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA1Q9Y5H4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA1Q9Y5H4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA1Q9Y5H4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA1Q9Y5H4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA1Q9Y5H4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA1Q9Y5H4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.58■□□□□ 0.72
PCDHGA1Q9Y5H4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGA1Q9Y5H4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHGA1Q9Y5H4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
PCDHGA1Q9Y5H4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA1Q9Y5H4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA1Q9Y5H4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA1Q9Y5H4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGA1Q9Y5H4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA1Q9Y5H4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDHGA1Q9Y5H4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGA1Q9Y5H4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA1Q9Y5H4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA1Q9Y5H4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA1Q9Y5H4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA1Q9Y5H4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA1Q9Y5H4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA1Q9Y5H4 HTR7P1-201ENST00000538670 1336 ntBASIC19.56■□□□□ 0.72
PCDHGA1Q9Y5H4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA1Q9Y5H4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA1Q9Y5H4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA1Q9Y5H4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA1Q9Y5H4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PCDHGA1Q9Y5H4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PCDHGA1Q9Y5H4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHGA1Q9Y5H4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.56■□□□□ 0.72
PCDHGA1Q9Y5H4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGA1Q9Y5H4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGA1Q9Y5H4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA1Q9Y5H4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA1Q9Y5H4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA1Q9Y5H4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA1Q9Y5H4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA1Q9Y5H4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA1Q9Y5H4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA1Q9Y5H4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA1Q9Y5H4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA1Q9Y5H4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA1Q9Y5H4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA1Q9Y5H4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA1Q9Y5H4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA1Q9Y5H4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA1Q9Y5H4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA1Q9Y5H4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA1Q9Y5H4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA1Q9Y5H4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA1Q9Y5H4 RN7SL850P-201ENST00000579959 291 ntBASIC19.55■□□□□ 0.72
PCDHGA1Q9Y5H4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGA1Q9Y5H4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGA1Q9Y5H4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGA1Q9Y5H4 AL590326.2-201ENST00000625139 305 ntBASIC19.55■□□□□ 0.72
PCDHGA1Q9Y5H4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PCDHGA1Q9Y5H4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PCDHGA1Q9Y5H4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHGA1Q9Y5H4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGA1Q9Y5H4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA1Q9Y5H4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
PCDHGA1Q9Y5H4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHGA1Q9Y5H4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA1Q9Y5H4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA1Q9Y5H4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA1Q9Y5H4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHGA1Q9Y5H4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHGA1Q9Y5H4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.54■□□□□ 0.72
PCDHGA1Q9Y5H4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA1Q9Y5H4 AC092865.7-201ENST00000641832 219 ntBASIC19.54■□□□□ 0.72
PCDHGA1Q9Y5H4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA1Q9Y5H4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PCDHGA1Q9Y5H4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA1Q9Y5H4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA1Q9Y5H4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA1Q9Y5H4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHGA1Q9Y5H4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA1Q9Y5H4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDHGA1Q9Y5H4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.53■□□□□ 0.72
PCDHGA1Q9Y5H4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms