Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.82□□□□□ -0.04
HHLA3Q9XRX5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.82□□□□□ -0.04
HHLA3Q9XRX5 AC008175.2-201ENST00000612840 297 ntBASIC14.82□□□□□ -0.04
HHLA3Q9XRX5 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HHLA3Q9XRX5 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HHLA3Q9XRX5 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HHLA3Q9XRX5 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HHLA3Q9XRX5 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HHLA3Q9XRX5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HHLA3Q9XRX5 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HHLA3Q9XRX5 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HHLA3Q9XRX5 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC14.82□□□□□ -0.04
HHLA3Q9XRX5 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.82□□□□□ -0.04
HHLA3Q9XRX5 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 AC112907.3-201ENST00000577781 2400 ntBASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 TESC-206ENST00000541210 936 ntTSL 3 BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 PARN-205ENST00000539279 1557 ntTSL 2 BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC14.81□□□□□ -0.04
HHLA3Q9XRX5 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HHLA3Q9XRX5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC14.8□□□□□ -0.04
HHLA3Q9XRX5 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
HHLA3Q9XRX5 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HHLA3Q9XRX5 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC14.8□□□□□ -0.04
HHLA3Q9XRX5 SERP1-208ENST00000491660 830 ntTSL 2 BASIC14.8□□□□□ -0.04
HHLA3Q9XRX5 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HHLA3Q9XRX5 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HHLA3Q9XRX5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HHLA3Q9XRX5 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HHLA3Q9XRX5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
HHLA3Q9XRX5 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.8□□□□□ -0.04
HHLA3Q9XRX5 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC14.8□□□□□ -0.04
HHLA3Q9XRX5 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HHLA3Q9XRX5 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HHLA3Q9XRX5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
HHLA3Q9XRX5 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HHLA3Q9XRX5 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
HHLA3Q9XRX5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HHLA3Q9XRX5 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC14.79□□□□□ -0.04
HHLA3Q9XRX5 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HHLA3Q9XRX5 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HHLA3Q9XRX5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.79□□□□□ -0.04
HHLA3Q9XRX5 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HHLA3Q9XRX5 POU5F1P4-201ENST00000413175 1085 ntBASIC14.79□□□□□ -0.04
HHLA3Q9XRX5 AC097381.1-201ENST00000429019 1296 ntBASIC14.79□□□□□ -0.04
HHLA3Q9XRX5 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HHLA3Q9XRX5 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HHLA3Q9XRX5 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HHLA3Q9XRX5 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC14.79□□□□□ -0.04
HHLA3Q9XRX5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HHLA3Q9XRX5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.79□□□□□ -0.04
HHLA3Q9XRX5 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC14.79□□□□□ -0.04
HHLA3Q9XRX5 AC120498.10-201ENST00000621827 505 ntBASIC14.79□□□□□ -0.04
HHLA3Q9XRX5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HHLA3Q9XRX5 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HHLA3Q9XRX5 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 LETM1P2-201ENST00000597330 2178 ntBASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 AP004607.4-201ENST00000530158 1459 ntBASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms