Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.63■□□□□ 0.89
CHMP2BQ9UQN3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.63■□□□□ 0.89
CHMP2BQ9UQN3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMP2BQ9UQN3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMP2BQ9UQN3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CHMP2BQ9UQN3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.63■□□□□ 0.89
CHMP2BQ9UQN3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP2BQ9UQN3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMP2BQ9UQN3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CHMP2BQ9UQN3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CHMP2BQ9UQN3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP2BQ9UQN3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP2BQ9UQN3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMP2BQ9UQN3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2BQ9UQN3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2BQ9UQN3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2BQ9UQN3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2BQ9UQN3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.62■□□□□ 0.89
CHMP2BQ9UQN3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.62■□□□□ 0.89
CHMP2BQ9UQN3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2BQ9UQN3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2BQ9UQN3 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.62■□□□□ 0.89
CHMP2BQ9UQN3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2BQ9UQN3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2BQ9UQN3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.62■□□□□ 0.89
CHMP2BQ9UQN3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2BQ9UQN3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.62■□□□□ 0.89
CHMP2BQ9UQN3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CHMP2BQ9UQN3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2BQ9UQN3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2BQ9UQN3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2BQ9UQN3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2BQ9UQN3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2BQ9UQN3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2BQ9UQN3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2BQ9UQN3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2BQ9UQN3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.61■□□□□ 0.89
CHMP2BQ9UQN3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2BQ9UQN3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2BQ9UQN3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.61■□□□□ 0.89
CHMP2BQ9UQN3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2BQ9UQN3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CHMP2BQ9UQN3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.61■□□□□ 0.89
CHMP2BQ9UQN3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2BQ9UQN3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2BQ9UQN3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2BQ9UQN3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.61■□□□□ 0.89
CHMP2BQ9UQN3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CHMP2BQ9UQN3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.61■□□□□ 0.89
CHMP2BQ9UQN3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2BQ9UQN3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2BQ9UQN3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2BQ9UQN3 CCDC92B-201ENST00000575506 885 ntBASIC20.61■□□□□ 0.89
CHMP2BQ9UQN3 TERF1P2-201ENST00000583350 1212 ntBASIC20.61■□□□□ 0.89
CHMP2BQ9UQN3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2BQ9UQN3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2BQ9UQN3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2BQ9UQN3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.61■□□□□ 0.89
CHMP2BQ9UQN3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2BQ9UQN3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2BQ9UQN3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.6■□□□□ 0.89
CHMP2BQ9UQN3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CHMP2BQ9UQN3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP2BQ9UQN3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP2BQ9UQN3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP2BQ9UQN3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CHMP2BQ9UQN3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP2BQ9UQN3 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.6■□□□□ 0.89
CHMP2BQ9UQN3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.6■□□□□ 0.89
CHMP2BQ9UQN3 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.6■□□□□ 0.89
CHMP2BQ9UQN3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.6■□□□□ 0.89
CHMP2BQ9UQN3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP2BQ9UQN3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP2BQ9UQN3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP2BQ9UQN3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP2BQ9UQN3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP2BQ9UQN3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP2BQ9UQN3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP2BQ9UQN3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.59■□□□□ 0.89
CHMP2BQ9UQN3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP2BQ9UQN3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP2BQ9UQN3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP2BQ9UQN3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP2BQ9UQN3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP2BQ9UQN3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP2BQ9UQN3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CHMP2BQ9UQN3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CHMP2BQ9UQN3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CHMP2BQ9UQN3 AC091799.1-201ENST00000422823 811 ntBASIC20.59■□□□□ 0.89
CHMP2BQ9UQN3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP2BQ9UQN3 AC123595.1-201ENST00000440769 1046 ntBASIC20.59■□□□□ 0.89
CHMP2BQ9UQN3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.59■□□□□ 0.89
CHMP2BQ9UQN3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.59■□□□□ 0.89
CHMP2BQ9UQN3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CHMP2BQ9UQN3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP2BQ9UQN3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP2BQ9UQN3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.59■□□□□ 0.89
CHMP2BQ9UQN3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP2BQ9UQN3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP2BQ9UQN3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms