Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.81■□□□□ 0.92
RABGEF1Q9UJ41 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RABGEF1Q9UJ41 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RABGEF1Q9UJ41 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RABGEF1Q9UJ41 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RABGEF1Q9UJ41 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.81■□□□□ 0.92
RABGEF1Q9UJ41 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.81■□□□□ 0.92
RABGEF1Q9UJ41 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
RABGEF1Q9UJ41 DUX4L16-201ENST00000555130 1264 ntBASIC20.81■□□□□ 0.92
RABGEF1Q9UJ41 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RABGEF1Q9UJ41 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.81■□□□□ 0.92
RABGEF1Q9UJ41 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RABGEF1Q9UJ41 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RABGEF1Q9UJ41 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RABGEF1Q9UJ41 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RABGEF1Q9UJ41 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RABGEF1Q9UJ41 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.81■□□□□ 0.92
RABGEF1Q9UJ41 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RABGEF1Q9UJ41 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RABGEF1Q9UJ41 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.8■□□□□ 0.92
RABGEF1Q9UJ41 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.8■□□□□ 0.92
RABGEF1Q9UJ41 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.8■□□□□ 0.92
RABGEF1Q9UJ41 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.8■□□□□ 0.92
RABGEF1Q9UJ41 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.8■□□□□ 0.92
RABGEF1Q9UJ41 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
RABGEF1Q9UJ41 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RABGEF1Q9UJ41 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RABGEF1Q9UJ41 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.8■□□□□ 0.92
RABGEF1Q9UJ41 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.8■□□□□ 0.92
RABGEF1Q9UJ41 AP001160.3-201ENST00000601484 763 ntBASIC20.8■□□□□ 0.92
RABGEF1Q9UJ41 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RABGEF1Q9UJ41 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RABGEF1Q9UJ41 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.8■□□□□ 0.92
RABGEF1Q9UJ41 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RABGEF1Q9UJ41 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.8■□□□□ 0.92
RABGEF1Q9UJ41 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RABGEF1Q9UJ41 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.8■□□□□ 0.92
RABGEF1Q9UJ41 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RABGEF1Q9UJ41 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RABGEF1Q9UJ41 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RABGEF1Q9UJ41 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RABGEF1Q9UJ41 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RABGEF1Q9UJ41 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.79■□□□□ 0.92
RABGEF1Q9UJ41 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RABGEF1Q9UJ41 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.79■□□□□ 0.92
RABGEF1Q9UJ41 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RABGEF1Q9UJ41 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.79■□□□□ 0.92
RABGEF1Q9UJ41 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.79■□□□□ 0.92
RABGEF1Q9UJ41 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.79■□□□□ 0.92
RABGEF1Q9UJ41 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
RABGEF1Q9UJ41 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.79■□□□□ 0.92
RABGEF1Q9UJ41 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RABGEF1Q9UJ41 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RABGEF1Q9UJ41 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RABGEF1Q9UJ41 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RABGEF1Q9UJ41 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RABGEF1Q9UJ41 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RABGEF1Q9UJ41 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RABGEF1Q9UJ41 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.78■□□□□ 0.92
RABGEF1Q9UJ41 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RABGEF1Q9UJ41 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RABGEF1Q9UJ41 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RABGEF1Q9UJ41 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RABGEF1Q9UJ41 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.78■□□□□ 0.92
RABGEF1Q9UJ41 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.78■□□□□ 0.92
RABGEF1Q9UJ41 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RABGEF1Q9UJ41 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RABGEF1Q9UJ41 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
RABGEF1Q9UJ41 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RABGEF1Q9UJ41 GPX1P1-201ENST00000388829 606 ntBASIC20.78■□□□□ 0.92
RABGEF1Q9UJ41 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.78■□□□□ 0.92
RABGEF1Q9UJ41 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RABGEF1Q9UJ41 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.78■□□□□ 0.92
RABGEF1Q9UJ41 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.78■□□□□ 0.92
RABGEF1Q9UJ41 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
RABGEF1Q9UJ41 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RABGEF1Q9UJ41 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RABGEF1Q9UJ41 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.78■□□□□ 0.92
RABGEF1Q9UJ41 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RABGEF1Q9UJ41 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RABGEF1Q9UJ41 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.77■□□□□ 0.92
RABGEF1Q9UJ41 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
RABGEF1Q9UJ41 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.77■□□□□ 0.92
RABGEF1Q9UJ41 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.77■□□□□ 0.92
RABGEF1Q9UJ41 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RABGEF1Q9UJ41 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.77■□□□□ 0.92
RABGEF1Q9UJ41 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.77■□□□□ 0.92
RABGEF1Q9UJ41 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RABGEF1Q9UJ41 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.77■□□□□ 0.92
RABGEF1Q9UJ41 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RABGEF1Q9UJ41 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RABGEF1Q9UJ41 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.91
RABGEF1Q9UJ41 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RABGEF1Q9UJ41 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.76■□□□□ 0.91
RABGEF1Q9UJ41 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RABGEF1Q9UJ41 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
RABGEF1Q9UJ41 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RABGEF1Q9UJ41 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RABGEF1Q9UJ41 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RABGEF1Q9UJ41 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms