Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
SPHK1Q9NYA1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SPHK1Q9NYA1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SPHK1Q9NYA1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.58■□□□□ 0.73
SPHK1Q9NYA1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SPHK1Q9NYA1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SPHK1Q9NYA1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.58■□□□□ 0.73
SPHK1Q9NYA1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SPHK1Q9NYA1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.58■□□□□ 0.72
SPHK1Q9NYA1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.58■□□□□ 0.72
SPHK1Q9NYA1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.58■□□□□ 0.72
SPHK1Q9NYA1 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.58■□□□□ 0.72
SPHK1Q9NYA1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.58■□□□□ 0.72
SPHK1Q9NYA1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.58■□□□□ 0.72
SPHK1Q9NYA1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.58■□□□□ 0.72
SPHK1Q9NYA1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.58■□□□□ 0.72
SPHK1Q9NYA1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SPHK1Q9NYA1 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.58■□□□□ 0.72
SPHK1Q9NYA1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.58■□□□□ 0.72
SPHK1Q9NYA1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SPHK1Q9NYA1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SPHK1Q9NYA1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPHK1Q9NYA1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPHK1Q9NYA1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.57■□□□□ 0.72
SPHK1Q9NYA1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.57■□□□□ 0.72
SPHK1Q9NYA1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
SPHK1Q9NYA1 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SPHK1Q9NYA1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPHK1Q9NYA1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SPHK1Q9NYA1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPHK1Q9NYA1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPHK1Q9NYA1 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPHK1Q9NYA1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SPHK1Q9NYA1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.57■□□□□ 0.72
SPHK1Q9NYA1 MIR4651-201ENST00000582622 73 ntBASIC19.57■□□□□ 0.72
SPHK1Q9NYA1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.57■□□□□ 0.72
SPHK1Q9NYA1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.57■□□□□ 0.72
SPHK1Q9NYA1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPHK1Q9NYA1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SPHK1Q9NYA1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.57■□□□□ 0.72
SPHK1Q9NYA1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPHK1Q9NYA1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.57■□□□□ 0.72
SPHK1Q9NYA1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPHK1Q9NYA1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPHK1Q9NYA1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPHK1Q9NYA1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPHK1Q9NYA1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SPHK1Q9NYA1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPHK1Q9NYA1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.56■□□□□ 0.72
SPHK1Q9NYA1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SPHK1Q9NYA1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SPHK1Q9NYA1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPHK1Q9NYA1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPHK1Q9NYA1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.56■□□□□ 0.72
SPHK1Q9NYA1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPHK1Q9NYA1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPHK1Q9NYA1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPHK1Q9NYA1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPHK1Q9NYA1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SPHK1Q9NYA1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPHK1Q9NYA1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPHK1Q9NYA1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SPHK1Q9NYA1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPHK1Q9NYA1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPHK1Q9NYA1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPHK1Q9NYA1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPHK1Q9NYA1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SPHK1Q9NYA1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.55■□□□□ 0.72
SPHK1Q9NYA1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.55■□□□□ 0.72
SPHK1Q9NYA1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.55■□□□□ 0.72
SPHK1Q9NYA1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
SPHK1Q9NYA1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SPHK1Q9NYA1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPHK1Q9NYA1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPHK1Q9NYA1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPHK1Q9NYA1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPHK1Q9NYA1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SPHK1Q9NYA1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPHK1Q9NYA1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SPHK1Q9NYA1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.54■□□□□ 0.72
SPHK1Q9NYA1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.54■□□□□ 0.72
SPHK1Q9NYA1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPHK1Q9NYA1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.54■□□□□ 0.72
SPHK1Q9NYA1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPHK1Q9NYA1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPHK1Q9NYA1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SPHK1Q9NYA1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPHK1Q9NYA1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPHK1Q9NYA1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.54■□□□□ 0.72
SPHK1Q9NYA1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.54■□□□□ 0.72
SPHK1Q9NYA1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.54■□□□□ 0.72
SPHK1Q9NYA1 HLA-B-256ENST00000639848 1089 ntBASIC19.54■□□□□ 0.72
SPHK1Q9NYA1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPHK1Q9NYA1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPHK1Q9NYA1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPHK1Q9NYA1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPHK1Q9NYA1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SPHK1Q9NYA1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPHK1Q9NYA1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPHK1Q9NYA1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms