Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC23.07■■□□□ 1.28
RNF216Q9NWF9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
RNF216Q9NWF9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.07■■□□□ 1.28
RNF216Q9NWF9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF216Q9NWF9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF216Q9NWF9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.06■■□□□ 1.28
RNF216Q9NWF9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF216Q9NWF9 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF216Q9NWF9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF216Q9NWF9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
RNF216Q9NWF9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.06■■□□□ 1.28
RNF216Q9NWF9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF216Q9NWF9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
RNF216Q9NWF9 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF216Q9NWF9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF216Q9NWF9 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
RNF216Q9NWF9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.06■■□□□ 1.28
RNF216Q9NWF9 AL513283.1-201ENST00000441790 1087 ntTSL 5 BASIC23.06■■□□□ 1.28
RNF216Q9NWF9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
RNF216Q9NWF9 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.06■■□□□ 1.28
RNF216Q9NWF9 AC092337.1-201ENST00000568699 1129 ntBASIC23.06■■□□□ 1.28
RNF216Q9NWF9 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.06■■□□□ 1.28
RNF216Q9NWF9 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
RNF216Q9NWF9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC23.06■■□□□ 1.28
RNF216Q9NWF9 AF106564.1-201ENST00000607058 2553 ntBASIC23.06■■□□□ 1.28
RNF216Q9NWF9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
RNF216Q9NWF9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
RNF216Q9NWF9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF216Q9NWF9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF216Q9NWF9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RNF216Q9NWF9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF216Q9NWF9 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF216Q9NWF9 IL4-201ENST00000231449 616 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF216Q9NWF9 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF216Q9NWF9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.05■■□□□ 1.28
RNF216Q9NWF9 HAUS1P1-201ENST00000505275 832 ntBASIC23.05■■□□□ 1.28
RNF216Q9NWF9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.05■■□□□ 1.28
RNF216Q9NWF9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.05■■□□□ 1.28
RNF216Q9NWF9 IL4-204ENST00000622422 717 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RNF216Q9NWF9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.05■■□□□ 1.28
RNF216Q9NWF9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23.05■■□□□ 1.28
RNF216Q9NWF9 AC068338.2-201ENST00000563278 1430 ntBASIC23.05■■□□□ 1.28
RNF216Q9NWF9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.05■■□□□ 1.28
RNF216Q9NWF9 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF216Q9NWF9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF216Q9NWF9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
RNF216Q9NWF9 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF216Q9NWF9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
RNF216Q9NWF9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF216Q9NWF9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC23.04■■□□□ 1.28
RNF216Q9NWF9 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC23.04■■□□□ 1.28
RNF216Q9NWF9 FAM201B-201ENST00000458407 597 ntBASIC23.04■■□□□ 1.28
RNF216Q9NWF9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.04■■□□□ 1.28
RNF216Q9NWF9 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC23.04■■□□□ 1.28
RNF216Q9NWF9 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.04■■□□□ 1.28
RNF216Q9NWF9 AL162412.1-201ENST00000567129 965 ntBASIC23.04■■□□□ 1.28
RNF216Q9NWF9 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.04■■□□□ 1.28
RNF216Q9NWF9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RNF216Q9NWF9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RNF216Q9NWF9 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
RNF216Q9NWF9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
RNF216Q9NWF9 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RNF216Q9NWF9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF216Q9NWF9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF216Q9NWF9 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF216Q9NWF9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF216Q9NWF9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.03■■□□□ 1.28
RNF216Q9NWF9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
RNF216Q9NWF9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RNF216Q9NWF9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.03■■□□□ 1.28
RNF216Q9NWF9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RNF216Q9NWF9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF216Q9NWF9 CYP2T1P-201ENST00000432607 1285 ntBASIC23.03■■□□□ 1.28
RNF216Q9NWF9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.03■■□□□ 1.28
RNF216Q9NWF9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.03■■□□□ 1.28
RNF216Q9NWF9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RNF216Q9NWF9 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF216Q9NWF9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.03■■□□□ 1.28
RNF216Q9NWF9 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
RNF216Q9NWF9 AL591767.1-201ENST00000557160 568 ntTSL 4 BASIC23.03■■□□□ 1.28
RNF216Q9NWF9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.03■■□□□ 1.28
RNF216Q9NWF9 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC23.03■■□□□ 1.28
RNF216Q9NWF9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.03■■□□□ 1.28
RNF216Q9NWF9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF216Q9NWF9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF216Q9NWF9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
RNF216Q9NWF9 MKRN4P-201ENST00000444706 1521 ntBASIC23.03■■□□□ 1.28
RNF216Q9NWF9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23.02■■□□□ 1.28
RNF216Q9NWF9 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RNF216Q9NWF9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF216Q9NWF9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RNF216Q9NWF9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC23.02■■□□□ 1.28
RNF216Q9NWF9 KRT16P2-201ENST00000414673 1423 ntBASIC23.02■■□□□ 1.28
RNF216Q9NWF9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF216Q9NWF9 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.02■■□□□ 1.28
RNF216Q9NWF9 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC23.02■■□□□ 1.28
RNF216Q9NWF9 AC007041.1-201ENST00000438989 1155 ntBASIC23.02■■□□□ 1.28
RNF216Q9NWF9 MTND1P31-201ENST00000449206 961 ntBASIC23.02■■□□□ 1.28
RNF216Q9NWF9 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RNF216Q9NWF9 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms