Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 AC005332.7-201ENST00000614046 2005 ntBASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC10.51□□□□□ -0.73
CDC42SE1Q9NRR8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 AC068880.1-201ENST00000507289 2297 ntBASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 PWWP2AP1-201ENST00000429776 2273 ntBASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
CDC42SE1Q9NRR8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms