Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HINT3Q9NQE9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.32■□□□□ 0.52
HINT3Q9NQE9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HINT3Q9NQE9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.32■□□□□ 0.52
HINT3Q9NQE9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
HINT3Q9NQE9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.32■□□□□ 0.52
HINT3Q9NQE9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.32■□□□□ 0.52
HINT3Q9NQE9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.32■□□□□ 0.52
HINT3Q9NQE9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.32■□□□□ 0.52
HINT3Q9NQE9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HINT3Q9NQE9 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HINT3Q9NQE9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HINT3Q9NQE9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HINT3Q9NQE9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HINT3Q9NQE9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HINT3Q9NQE9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HINT3Q9NQE9 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HINT3Q9NQE9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HINT3Q9NQE9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HINT3Q9NQE9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HINT3Q9NQE9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HINT3Q9NQE9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HINT3Q9NQE9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HINT3Q9NQE9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HINT3Q9NQE9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HINT3Q9NQE9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.31■□□□□ 0.52
HINT3Q9NQE9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.31■□□□□ 0.52
HINT3Q9NQE9 KRT18P5-201ENST00000436075 1291 ntBASIC18.31■□□□□ 0.52
HINT3Q9NQE9 NTF6G-201ENST00000591094 616 ntBASIC18.31■□□□□ 0.52
HINT3Q9NQE9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
HINT3Q9NQE9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.31■□□□□ 0.52
HINT3Q9NQE9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HINT3Q9NQE9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.31■□□□□ 0.52
HINT3Q9NQE9 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HINT3Q9NQE9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HINT3Q9NQE9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HINT3Q9NQE9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HINT3Q9NQE9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HINT3Q9NQE9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HINT3Q9NQE9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HINT3Q9NQE9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.29■□□□□ 0.52
HINT3Q9NQE9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HINT3Q9NQE9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HINT3Q9NQE9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.29■□□□□ 0.52
HINT3Q9NQE9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.29■□□□□ 0.52
HINT3Q9NQE9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HINT3Q9NQE9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HINT3Q9NQE9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HINT3Q9NQE9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.29■□□□□ 0.52
HINT3Q9NQE9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
HINT3Q9NQE9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.29■□□□□ 0.52
HINT3Q9NQE9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
HINT3Q9NQE9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HINT3Q9NQE9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.29■□□□□ 0.52
HINT3Q9NQE9 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
HINT3Q9NQE9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HINT3Q9NQE9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.29■□□□□ 0.52
HINT3Q9NQE9 AC116050.2-201ENST00000612102 1779 ntBASIC18.29■□□□□ 0.52
HINT3Q9NQE9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HINT3Q9NQE9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.29■□□□□ 0.52
HINT3Q9NQE9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.29■□□□□ 0.52
HINT3Q9NQE9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HINT3Q9NQE9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HINT3Q9NQE9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HINT3Q9NQE9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HINT3Q9NQE9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.28■□□□□ 0.52
HINT3Q9NQE9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HINT3Q9NQE9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HINT3Q9NQE9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HINT3Q9NQE9 AC092666.2-201ENST00000613287 246 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms