Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.22■□□□□ 0.67
MKKSQ9NPJ1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.22■□□□□ 0.67
MKKSQ9NPJ1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.22■□□□□ 0.67
MKKSQ9NPJ1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.22■□□□□ 0.67
MKKSQ9NPJ1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MKKSQ9NPJ1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.22■□□□□ 0.67
MKKSQ9NPJ1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
MKKSQ9NPJ1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MKKSQ9NPJ1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MKKSQ9NPJ1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.22■□□□□ 0.67
MKKSQ9NPJ1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MKKSQ9NPJ1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MKKSQ9NPJ1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
MKKSQ9NPJ1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MKKSQ9NPJ1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MKKSQ9NPJ1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MKKSQ9NPJ1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MKKSQ9NPJ1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.21■□□□□ 0.67
MKKSQ9NPJ1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.21■□□□□ 0.67
MKKSQ9NPJ1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.21■□□□□ 0.67
MKKSQ9NPJ1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
MKKSQ9NPJ1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MKKSQ9NPJ1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.21■□□□□ 0.67
MKKSQ9NPJ1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.21■□□□□ 0.67
MKKSQ9NPJ1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MKKSQ9NPJ1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.2■□□□□ 0.66
MKKSQ9NPJ1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.2■□□□□ 0.66
MKKSQ9NPJ1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MKKSQ9NPJ1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MKKSQ9NPJ1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.2■□□□□ 0.66
MKKSQ9NPJ1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
MKKSQ9NPJ1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MKKSQ9NPJ1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MKKSQ9NPJ1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.2■□□□□ 0.66
MKKSQ9NPJ1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MKKSQ9NPJ1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MKKSQ9NPJ1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.2■□□□□ 0.66
MKKSQ9NPJ1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
MKKSQ9NPJ1 C2orf69P4-201ENST00000565394 541 ntBASIC19.2■□□□□ 0.66
MKKSQ9NPJ1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.2■□□□□ 0.66
MKKSQ9NPJ1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
MKKSQ9NPJ1 HLA-B-256ENST00000639848 1089 ntBASIC19.2■□□□□ 0.66
MKKSQ9NPJ1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MKKSQ9NPJ1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
MKKSQ9NPJ1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MKKSQ9NPJ1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
MKKSQ9NPJ1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MKKSQ9NPJ1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MKKSQ9NPJ1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
MKKSQ9NPJ1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
MKKSQ9NPJ1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
MKKSQ9NPJ1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MKKSQ9NPJ1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.19■□□□□ 0.66
MKKSQ9NPJ1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
MKKSQ9NPJ1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MKKSQ9NPJ1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
MKKSQ9NPJ1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
MKKSQ9NPJ1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
MKKSQ9NPJ1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MKKSQ9NPJ1 ABHD17AP1-201ENST00000358206 933 ntBASIC19.19■□□□□ 0.66
MKKSQ9NPJ1 TSPY20P-201ENST00000450910 630 ntBASIC19.19■□□□□ 0.66
MKKSQ9NPJ1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MKKSQ9NPJ1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.19■□□□□ 0.66
MKKSQ9NPJ1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MKKSQ9NPJ1 AC060766.5-201ENST00000590539 871 ntBASIC19.19■□□□□ 0.66
MKKSQ9NPJ1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MKKSQ9NPJ1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
MKKSQ9NPJ1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MKKSQ9NPJ1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
MKKSQ9NPJ1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MKKSQ9NPJ1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MKKSQ9NPJ1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MKKSQ9NPJ1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
MKKSQ9NPJ1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MKKSQ9NPJ1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MKKSQ9NPJ1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.18■□□□□ 0.66
MKKSQ9NPJ1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
MKKSQ9NPJ1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MKKSQ9NPJ1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
MKKSQ9NPJ1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.18■□□□□ 0.66
MKKSQ9NPJ1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.18■□□□□ 0.66
MKKSQ9NPJ1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.18■□□□□ 0.66
MKKSQ9NPJ1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
MKKSQ9NPJ1 FAM201B-201ENST00000458407 597 ntBASIC19.18■□□□□ 0.66
MKKSQ9NPJ1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.18■□□□□ 0.66
MKKSQ9NPJ1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.18■□□□□ 0.66
MKKSQ9NPJ1 MIR4651-201ENST00000582622 73 ntBASIC19.18■□□□□ 0.66
MKKSQ9NPJ1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.18■□□□□ 0.66
MKKSQ9NPJ1 MIR2861-201ENST00000636310 90 ntBASIC19.18■□□□□ 0.66
MKKSQ9NPJ1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.18■□□□□ 0.66
MKKSQ9NPJ1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MKKSQ9NPJ1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MKKSQ9NPJ1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MKKSQ9NPJ1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MKKSQ9NPJ1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MKKSQ9NPJ1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
MKKSQ9NPJ1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MKKSQ9NPJ1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MKKSQ9NPJ1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MKKSQ9NPJ1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms