Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZFYVE28Q9HCC9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
ZFYVE28Q9HCC9 AC127496.7-201ENST00000625110 1798 ntBASIC23.37■■□□□ 1.33
ZFYVE28Q9HCC9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
ZFYVE28Q9HCC9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC23.36■■□□□ 1.33
ZFYVE28Q9HCC9 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZFYVE28Q9HCC9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ZFYVE28Q9HCC9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.36■■□□□ 1.33
ZFYVE28Q9HCC9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZFYVE28Q9HCC9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZFYVE28Q9HCC9 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC23.36■■□□□ 1.33
ZFYVE28Q9HCC9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC23.36■■□□□ 1.33
ZFYVE28Q9HCC9 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZFYVE28Q9HCC9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
ZFYVE28Q9HCC9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
ZFYVE28Q9HCC9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZFYVE28Q9HCC9 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC23.35■■□□□ 1.33
ZFYVE28Q9HCC9 AC073508.3-201ENST00000619697 1419 ntBASIC23.35■■□□□ 1.33
ZFYVE28Q9HCC9 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZFYVE28Q9HCC9 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ZFYVE28Q9HCC9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZFYVE28Q9HCC9 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ZFYVE28Q9HCC9 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZFYVE28Q9HCC9 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC23.35■■□□□ 1.33
ZFYVE28Q9HCC9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC23.35■■□□□ 1.33
ZFYVE28Q9HCC9 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC23.35■■□□□ 1.33
ZFYVE28Q9HCC9 AC023632.3-201ENST00000521633 145 ntBASIC23.35■■□□□ 1.33
ZFYVE28Q9HCC9 CFL2-205ENST00000555765 632 ntTSL 2 BASIC23.35■■□□□ 1.33
ZFYVE28Q9HCC9 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC23.35■■□□□ 1.33
ZFYVE28Q9HCC9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
ZFYVE28Q9HCC9 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZFYVE28Q9HCC9 CYP2D8P-201ENST00000433633 1490 ntBASIC23.35■■□□□ 1.33
ZFYVE28Q9HCC9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC23.34■■□□□ 1.33
ZFYVE28Q9HCC9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ZFYVE28Q9HCC9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.34■■□□□ 1.33
ZFYVE28Q9HCC9 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC23.34■■□□□ 1.33
ZFYVE28Q9HCC9 DUX4L26-201ENST00000489078 1255 ntBASIC23.34■■□□□ 1.33
ZFYVE28Q9HCC9 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC23.34■■□□□ 1.33
ZFYVE28Q9HCC9 FITM1-202ENST00000559294 800 ntBASIC23.34■■□□□ 1.33
ZFYVE28Q9HCC9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC23.34■■□□□ 1.33
ZFYVE28Q9HCC9 AL121906.2-201ENST00000621597 723 ntBASIC23.34■■□□□ 1.33
ZFYVE28Q9HCC9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC23.34■■□□□ 1.33
ZFYVE28Q9HCC9 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
ZFYVE28Q9HCC9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZFYVE28Q9HCC9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ZFYVE28Q9HCC9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
ZFYVE28Q9HCC9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZFYVE28Q9HCC9 AC124283.5-201ENST00000624661 1809 ntBASIC23.33■■□□□ 1.33
ZFYVE28Q9HCC9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ZFYVE28Q9HCC9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ZFYVE28Q9HCC9 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ZFYVE28Q9HCC9 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
ZFYVE28Q9HCC9 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.33■■□□□ 1.33
ZFYVE28Q9HCC9 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
ZFYVE28Q9HCC9 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
ZFYVE28Q9HCC9 AL390955.1-201ENST00000428694 934 ntBASIC23.33■■□□□ 1.33
ZFYVE28Q9HCC9 SLC25A3P1-201ENST00000443844 931 ntBASIC23.33■■□□□ 1.33
ZFYVE28Q9HCC9 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
ZFYVE28Q9HCC9 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ZFYVE28Q9HCC9 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC23.33■■□□□ 1.33
ZFYVE28Q9HCC9 AC087388.1-201ENST00000571370 1112 ntBASIC23.33■■□□□ 1.33
ZFYVE28Q9HCC9 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
ZFYVE28Q9HCC9 AC010947.1-201ENST00000623454 693 ntBASIC23.33■■□□□ 1.33
ZFYVE28Q9HCC9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ZFYVE28Q9HCC9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.33■■□□□ 1.32
ZFYVE28Q9HCC9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
ZFYVE28Q9HCC9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.33■■□□□ 1.32
ZFYVE28Q9HCC9 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23.33■■□□□ 1.32
ZFYVE28Q9HCC9 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
ZFYVE28Q9HCC9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
ZFYVE28Q9HCC9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.33■■□□□ 1.32
ZFYVE28Q9HCC9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
ZFYVE28Q9HCC9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
ZFYVE28Q9HCC9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZFYVE28Q9HCC9 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZFYVE28Q9HCC9 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ZFYVE28Q9HCC9 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
ZFYVE28Q9HCC9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC23.32■■□□□ 1.32
ZFYVE28Q9HCC9 TMA16-209ENST00000513272 803 ntTSL 2 BASIC23.32■■□□□ 1.32
ZFYVE28Q9HCC9 PNN-205ENST00000556530 601 ntTSL 2 BASIC23.32■■□□□ 1.32
ZFYVE28Q9HCC9 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
ZFYVE28Q9HCC9 RBM42-202ENST00000586618 771 ntTSL 3 BASIC23.32■■□□□ 1.32
ZFYVE28Q9HCC9 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
ZFYVE28Q9HCC9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZFYVE28Q9HCC9 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ZFYVE28Q9HCC9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZFYVE28Q9HCC9 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.32■■□□□ 1.32
ZFYVE28Q9HCC9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
ZFYVE28Q9HCC9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.32■■□□□ 1.32
ZFYVE28Q9HCC9 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.32■■□□□ 1.32
ZFYVE28Q9HCC9 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ZFYVE28Q9HCC9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
ZFYVE28Q9HCC9 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZFYVE28Q9HCC9 AC104076.2-201ENST00000448912 469 ntBASIC23.31■■□□□ 1.32
ZFYVE28Q9HCC9 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC23.31■■□□□ 1.32
ZFYVE28Q9HCC9 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
ZFYVE28Q9HCC9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC23.31■■□□□ 1.32
ZFYVE28Q9HCC9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ZFYVE28Q9HCC9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.31■■□□□ 1.32
ZFYVE28Q9HCC9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms