Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC30.14■■■□□ 2.42
SCAF1Q9H7N4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC30.14■■■□□ 2.42
SCAF1Q9H7N4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC30.14■■■□□ 2.42
SCAF1Q9H7N4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
SCAF1Q9H7N4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
SCAF1Q9H7N4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
SCAF1Q9H7N4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC30.14■■■□□ 2.41
SCAF1Q9H7N4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
SCAF1Q9H7N4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC30.14■■■□□ 2.41
SCAF1Q9H7N4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC30.14■■■□□ 2.41
SCAF1Q9H7N4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SCAF1Q9H7N4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SCAF1Q9H7N4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SCAF1Q9H7N4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
SCAF1Q9H7N4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
SCAF1Q9H7N4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
SCAF1Q9H7N4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
SCAF1Q9H7N4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SCAF1Q9H7N4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SCAF1Q9H7N4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SCAF1Q9H7N4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC30.12■■■□□ 2.41
SCAF1Q9H7N4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
SCAF1Q9H7N4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
SCAF1Q9H7N4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
SCAF1Q9H7N4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SCAF1Q9H7N4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC30.12■■■□□ 2.41
SCAF1Q9H7N4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SCAF1Q9H7N4 AC007322.4-201ENST00000509611 723 ntBASIC30.12■■■□□ 2.41
SCAF1Q9H7N4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC30.12■■■□□ 2.41
SCAF1Q9H7N4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC30.12■■■□□ 2.41
SCAF1Q9H7N4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC30.12■■■□□ 2.41
SCAF1Q9H7N4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC30.12■■■□□ 2.41
SCAF1Q9H7N4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC30.11■■■□□ 2.41
SCAF1Q9H7N4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC30.11■■■□□ 2.41
SCAF1Q9H7N4 SERPINH1P1-201ENST00000419794 1249 ntBASIC30.11■■■□□ 2.41
SCAF1Q9H7N4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC30.11■■■□□ 2.41
SCAF1Q9H7N4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC30.11■■■□□ 2.41
SCAF1Q9H7N4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
SCAF1Q9H7N4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC30.11■■■□□ 2.41
SCAF1Q9H7N4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC30.11■■■□□ 2.41
SCAF1Q9H7N4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC30.1■■■□□ 2.41
SCAF1Q9H7N4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
SCAF1Q9H7N4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC30.1■■■□□ 2.41
SCAF1Q9H7N4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC30.1■■■□□ 2.41
SCAF1Q9H7N4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SCAF1Q9H7N4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
SCAF1Q9H7N4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC30.1■■■□□ 2.41
SCAF1Q9H7N4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC30.1■■■□□ 2.41
SCAF1Q9H7N4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC30.1■■■□□ 2.41
SCAF1Q9H7N4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC30.1■■■□□ 2.41
SCAF1Q9H7N4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC30.1■■■□□ 2.41
SCAF1Q9H7N4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
SCAF1Q9H7N4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SCAF1Q9H7N4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SCAF1Q9H7N4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC30.09■■■□□ 2.41
SCAF1Q9H7N4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SCAF1Q9H7N4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SCAF1Q9H7N4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC30.09■■■□□ 2.41
SCAF1Q9H7N4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC30.09■■■□□ 2.41
SCAF1Q9H7N4 AL589935.2-201ENST00000616471 1231 ntBASIC30.09■■■□□ 2.41
SCAF1Q9H7N4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC30.09■■■□□ 2.41
SCAF1Q9H7N4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC30.09■■■□□ 2.41
SCAF1Q9H7N4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC30.09■■■□□ 2.41
SCAF1Q9H7N4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC30.08■■■□□ 2.41
SCAF1Q9H7N4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
SCAF1Q9H7N4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
SCAF1Q9H7N4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SCAF1Q9H7N4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC30.08■■■□□ 2.41
SCAF1Q9H7N4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SCAF1Q9H7N4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SCAF1Q9H7N4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SCAF1Q9H7N4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SCAF1Q9H7N4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
SCAF1Q9H7N4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC30.08■■■□□ 2.41
SCAF1Q9H7N4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
SCAF1Q9H7N4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC30.07■■■□□ 2.4
SCAF1Q9H7N4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
SCAF1Q9H7N4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
SCAF1Q9H7N4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SCAF1Q9H7N4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
SCAF1Q9H7N4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC30.07■■■□□ 2.4
SCAF1Q9H7N4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
SCAF1Q9H7N4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC30.07■■■□□ 2.4
SCAF1Q9H7N4 AC244517.3-201ENST00000616254 1235 ntBASIC30.07■■■□□ 2.4
SCAF1Q9H7N4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
SCAF1Q9H7N4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SCAF1Q9H7N4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SCAF1Q9H7N4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SCAF1Q9H7N4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
SCAF1Q9H7N4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
SCAF1Q9H7N4 TMPOP1-202ENST00000424642 1267 ntBASIC30.06■■■□□ 2.4
SCAF1Q9H7N4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC30.06■■■□□ 2.4
SCAF1Q9H7N4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
SCAF1Q9H7N4 AC008403.3-201ENST00000598924 454 ntBASIC30.06■■■□□ 2.4
SCAF1Q9H7N4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC30.06■■■□□ 2.4
SCAF1Q9H7N4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC30.06■■■□□ 2.4
SCAF1Q9H7N4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SCAF1Q9H7N4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
SCAF1Q9H7N4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SCAF1Q9H7N4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms