Protein–RNA interactions for Protein: Q9H7L9

SUDS3, Sin3 histone deacetylase corepressor complex component SDS3, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3Q9H7L9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SUDS3Q9H7L9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.69■□□□□ 0.9
SUDS3Q9H7L9 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SUDS3Q9H7L9 GPX1P1-201ENST00000388829 606 ntBASIC20.69■□□□□ 0.9
SUDS3Q9H7L9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
SUDS3Q9H7L9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SUDS3Q9H7L9 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SUDS3Q9H7L9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SUDS3Q9H7L9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SUDS3Q9H7L9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SUDS3Q9H7L9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SUDS3Q9H7L9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
SUDS3Q9H7L9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SUDS3Q9H7L9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SUDS3Q9H7L9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SUDS3Q9H7L9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SUDS3Q9H7L9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
SUDS3Q9H7L9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SUDS3Q9H7L9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.68■□□□□ 0.9
SUDS3Q9H7L9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.68■□□□□ 0.9
SUDS3Q9H7L9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SUDS3Q9H7L9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.68■□□□□ 0.9
SUDS3Q9H7L9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.68■□□□□ 0.9
SUDS3Q9H7L9 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SUDS3Q9H7L9 SLC7A5P1-201ENST00000568957 537 ntBASIC20.68■□□□□ 0.9
SUDS3Q9H7L9 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SUDS3Q9H7L9 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.68■□□□□ 0.9
SUDS3Q9H7L9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SUDS3Q9H7L9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SUDS3Q9H7L9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SUDS3Q9H7L9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SUDS3Q9H7L9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
SUDS3Q9H7L9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
SUDS3Q9H7L9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SUDS3Q9H7L9 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SUDS3Q9H7L9 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.68■□□□□ 0.9
SUDS3Q9H7L9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SUDS3Q9H7L9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SUDS3Q9H7L9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SUDS3Q9H7L9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SUDS3Q9H7L9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SUDS3Q9H7L9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SUDS3Q9H7L9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.67■□□□□ 0.9
SUDS3Q9H7L9 NCF1B-203ENST00000435988 1254 ntBASIC20.67■□□□□ 0.9
SUDS3Q9H7L9 AC083906.2-201ENST00000511578 360 ntBASIC20.67■□□□□ 0.9
SUDS3Q9H7L9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.67■□□□□ 0.9
SUDS3Q9H7L9 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.67■□□□□ 0.9
SUDS3Q9H7L9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.67■□□□□ 0.9
SUDS3Q9H7L9 AC013268.1-206ENST00000638368 961 ntBASIC20.67■□□□□ 0.9
SUDS3Q9H7L9 AC112229.1-201ENST00000639295 961 ntBASIC20.67■□□□□ 0.9
SUDS3Q9H7L9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SUDS3Q9H7L9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SUDS3Q9H7L9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SUDS3Q9H7L9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.67■□□□□ 0.9
SUDS3Q9H7L9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SUDS3Q9H7L9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SUDS3Q9H7L9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SUDS3Q9H7L9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SUDS3Q9H7L9 RBM17P2-201ENST00000616397 1405 ntBASIC20.67■□□□□ 0.9
SUDS3Q9H7L9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SUDS3Q9H7L9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SUDS3Q9H7L9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SUDS3Q9H7L9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SUDS3Q9H7L9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SUDS3Q9H7L9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SUDS3Q9H7L9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SUDS3Q9H7L9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SUDS3Q9H7L9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SUDS3Q9H7L9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SUDS3Q9H7L9 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SUDS3Q9H7L9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.66■□□□□ 0.9
SUDS3Q9H7L9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.66■□□□□ 0.9
SUDS3Q9H7L9 AL121832.2-201ENST00000610979 668 ntBASIC20.66■□□□□ 0.9
SUDS3Q9H7L9 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SUDS3Q9H7L9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.66■□□□□ 0.9
SUDS3Q9H7L9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SUDS3Q9H7L9 AC011484.1-201ENST00000377652 1995 ntBASIC20.66■□□□□ 0.9
SUDS3Q9H7L9 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SUDS3Q9H7L9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SUDS3Q9H7L9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SUDS3Q9H7L9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SUDS3Q9H7L9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.65■□□□□ 0.9
SUDS3Q9H7L9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SUDS3Q9H7L9 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SUDS3Q9H7L9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.65■□□□□ 0.9
SUDS3Q9H7L9 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
SUDS3Q9H7L9 CYP2T1P-201ENST00000432607 1285 ntBASIC20.65■□□□□ 0.9
SUDS3Q9H7L9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.65■□□□□ 0.9
SUDS3Q9H7L9 AC105036.2-201ENST00000569468 176 ntBASIC20.65■□□□□ 0.9
SUDS3Q9H7L9 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
SUDS3Q9H7L9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SUDS3Q9H7L9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SUDS3Q9H7L9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.64■□□□□ 0.9
SUDS3Q9H7L9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SUDS3Q9H7L9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.64■□□□□ 0.9
SUDS3Q9H7L9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SUDS3Q9H7L9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SUDS3Q9H7L9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.64■□□□□ 0.89
SUDS3Q9H7L9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SUDS3Q9H7L9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms