Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC25.62■■□□□ 1.69
CHMP4BQ9H444 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC25.62■■□□□ 1.69
CHMP4BQ9H444 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
CHMP4BQ9H444 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC25.62■■□□□ 1.69
CHMP4BQ9H444 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CHMP4BQ9H444 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC25.62■■□□□ 1.69
CHMP4BQ9H444 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
CHMP4BQ9H444 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC25.62■■□□□ 1.69
CHMP4BQ9H444 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CHMP4BQ9H444 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC25.62■■□□□ 1.69
CHMP4BQ9H444 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CHMP4BQ9H444 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
CHMP4BQ9H444 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
CHMP4BQ9H444 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CHMP4BQ9H444 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CHMP4BQ9H444 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
CHMP4BQ9H444 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CHMP4BQ9H444 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC25.61■■□□□ 1.69
CHMP4BQ9H444 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC25.61■■□□□ 1.69
CHMP4BQ9H444 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
CHMP4BQ9H444 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CHMP4BQ9H444 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC25.61■■□□□ 1.69
CHMP4BQ9H444 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC25.61■■□□□ 1.69
CHMP4BQ9H444 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC25.61■■□□□ 1.69
CHMP4BQ9H444 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CHMP4BQ9H444 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CHMP4BQ9H444 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CHMP4BQ9H444 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC25.6■■□□□ 1.69
CHMP4BQ9H444 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
CHMP4BQ9H444 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHMP4BQ9H444 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHMP4BQ9H444 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHMP4BQ9H444 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC25.6■■□□□ 1.69
CHMP4BQ9H444 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHMP4BQ9H444 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC25.6■■□□□ 1.69
CHMP4BQ9H444 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CHMP4BQ9H444 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHMP4BQ9H444 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHMP4BQ9H444 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
CHMP4BQ9H444 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC25.6■■□□□ 1.69
CHMP4BQ9H444 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC25.6■■□□□ 1.69
CHMP4BQ9H444 OR10C1-204ENST00000622521 1039 ntBASIC25.6■■□□□ 1.69
CHMP4BQ9H444 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHMP4BQ9H444 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
CHMP4BQ9H444 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
CHMP4BQ9H444 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC25.6■■□□□ 1.69
CHMP4BQ9H444 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHMP4BQ9H444 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC25.6■■□□□ 1.69
CHMP4BQ9H444 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHMP4BQ9H444 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC25.59■■□□□ 1.69
CHMP4BQ9H444 AL512408.1-201ENST00000569378 2000 ntBASIC25.59■■□□□ 1.69
CHMP4BQ9H444 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CHMP4BQ9H444 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
CHMP4BQ9H444 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CHMP4BQ9H444 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CHMP4BQ9H444 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC25.59■■□□□ 1.69
CHMP4BQ9H444 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CHMP4BQ9H444 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
CHMP4BQ9H444 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CHMP4BQ9H444 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC25.59■■□□□ 1.69
CHMP4BQ9H444 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC25.59■■□□□ 1.69
CHMP4BQ9H444 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC25.59■■□□□ 1.69
CHMP4BQ9H444 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
CHMP4BQ9H444 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CHMP4BQ9H444 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CHMP4BQ9H444 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CHMP4BQ9H444 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CHMP4BQ9H444 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC25.59■■□□□ 1.69
CHMP4BQ9H444 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC25.59■■□□□ 1.69
CHMP4BQ9H444 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CHMP4BQ9H444 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
CHMP4BQ9H444 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
CHMP4BQ9H444 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
CHMP4BQ9H444 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CHMP4BQ9H444 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CHMP4BQ9H444 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CHMP4BQ9H444 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CHMP4BQ9H444 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC25.58■■□□□ 1.69
CHMP4BQ9H444 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CHMP4BQ9H444 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC25.58■■□□□ 1.69
CHMP4BQ9H444 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CHMP4BQ9H444 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CHMP4BQ9H444 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC25.58■■□□□ 1.69
CHMP4BQ9H444 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CHMP4BQ9H444 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CHMP4BQ9H444 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC25.58■■□□□ 1.69
CHMP4BQ9H444 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CHMP4BQ9H444 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.68
CHMP4BQ9H444 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
CHMP4BQ9H444 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC25.58■■□□□ 1.68
CHMP4BQ9H444 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC25.57■■□□□ 1.68
CHMP4BQ9H444 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHMP4BQ9H444 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHMP4BQ9H444 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC25.57■■□□□ 1.68
CHMP4BQ9H444 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHMP4BQ9H444 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHMP4BQ9H444 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHMP4BQ9H444 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHMP4BQ9H444 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHMP4BQ9H444 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms