Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALX4Q9H161 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ALX4Q9H161 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ALX4Q9H161 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ALX4Q9H161 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ALX4Q9H161 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALX4Q9H161 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALX4Q9H161 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ALX4Q9H161 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ALX4Q9H161 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ALX4Q9H161 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ALX4Q9H161 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ALX4Q9H161 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.11■□□□□ 0.33
ALX4Q9H161 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALX4Q9H161 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALX4Q9H161 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.11■□□□□ 0.33
ALX4Q9H161 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.11■□□□□ 0.33
ALX4Q9H161 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALX4Q9H161 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALX4Q9H161 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ALX4Q9H161 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.11■□□□□ 0.33
ALX4Q9H161 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.11■□□□□ 0.33
ALX4Q9H161 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ALX4Q9H161 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALX4Q9H161 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALX4Q9H161 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALX4Q9H161 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALX4Q9H161 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
ALX4Q9H161 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.11■□□□□ 0.33
ALX4Q9H161 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALX4Q9H161 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ALX4Q9H161 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.1■□□□□ 0.33
ALX4Q9H161 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.1■□□□□ 0.33
ALX4Q9H161 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALX4Q9H161 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALX4Q9H161 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALX4Q9H161 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ALX4Q9H161 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.1■□□□□ 0.33
ALX4Q9H161 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ALX4Q9H161 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.1■□□□□ 0.33
ALX4Q9H161 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.1■□□□□ 0.33
ALX4Q9H161 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
ALX4Q9H161 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.1■□□□□ 0.33
ALX4Q9H161 AC027682.1-201ENST00000562846 899 ntBASIC17.1■□□□□ 0.33
ALX4Q9H161 AC233992.3-201ENST00000607491 485 ntBASIC17.1■□□□□ 0.33
ALX4Q9H161 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.1■□□□□ 0.33
ALX4Q9H161 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.1■□□□□ 0.33
ALX4Q9H161 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ALX4Q9H161 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ALX4Q9H161 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ALX4Q9H161 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALX4Q9H161 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALX4Q9H161 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ALX4Q9H161 TMEM179-206ENST00000616017 1645 ntBASIC17.1■□□□□ 0.33
ALX4Q9H161 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALX4Q9H161 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ALX4Q9H161 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.1■□□□□ 0.33
ALX4Q9H161 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ALX4Q9H161 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
ALX4Q9H161 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALX4Q9H161 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALX4Q9H161 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.09■□□□□ 0.33
ALX4Q9H161 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ALX4Q9H161 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALX4Q9H161 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.09■□□□□ 0.33
ALX4Q9H161 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALX4Q9H161 BX842568.3-201ENST00000418104 571 ntBASIC17.09■□□□□ 0.33
ALX4Q9H161 AC105265.2-201ENST00000467189 838 ntBASIC17.09■□□□□ 0.33
ALX4Q9H161 AC091305.1-201ENST00000479476 895 ntBASIC17.09■□□□□ 0.33
ALX4Q9H161 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.09■□□□□ 0.33
ALX4Q9H161 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.09■□□□□ 0.33
ALX4Q9H161 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALX4Q9H161 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALX4Q9H161 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALX4Q9H161 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.09■□□□□ 0.33
ALX4Q9H161 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ALX4Q9H161 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ALX4Q9H161 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ALX4Q9H161 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.09■□□□□ 0.33
ALX4Q9H161 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ALX4Q9H161 LETM1P2-201ENST00000597330 2178 ntBASIC17.09■□□□□ 0.33
ALX4Q9H161 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ALX4Q9H161 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.09■□□□□ 0.33
ALX4Q9H161 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ALX4Q9H161 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.09■□□□□ 0.33
ALX4Q9H161 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.09■□□□□ 0.33
ALX4Q9H161 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ALX4Q9H161 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ALX4Q9H161 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
ALX4Q9H161 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.08■□□□□ 0.33
ALX4Q9H161 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ALX4Q9H161 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ALX4Q9H161 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
ALX4Q9H161 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ALX4Q9H161 ZNRF2P3-201ENST00000424200 374 ntBASIC17.08■□□□□ 0.32
ALX4Q9H161 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
ALX4Q9H161 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.08■□□□□ 0.32
ALX4Q9H161 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ALX4Q9H161 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ALX4Q9H161 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms