Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC27.38■■□□□ 1.97
ABCA3Q99758 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ABCA3Q99758 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
ABCA3Q99758 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ABCA3Q99758 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ABCA3Q99758 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
ABCA3Q99758 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC27.37■■□□□ 1.97
ABCA3Q99758 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ABCA3Q99758 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC27.37■■□□□ 1.97
ABCA3Q99758 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC27.37■■□□□ 1.97
ABCA3Q99758 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC27.37■■□□□ 1.97
ABCA3Q99758 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ABCA3Q99758 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC27.36■■□□□ 1.97
ABCA3Q99758 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
ABCA3Q99758 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ABCA3Q99758 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC27.36■■□□□ 1.97
ABCA3Q99758 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
ABCA3Q99758 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC27.36■■□□□ 1.97
ABCA3Q99758 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC27.36■■□□□ 1.97
ABCA3Q99758 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
ABCA3Q99758 FITM1-202ENST00000559294 800 ntBASIC27.36■■□□□ 1.97
ABCA3Q99758 NAPSB-206ENST00000562112 1266 ntBASIC27.36■■□□□ 1.97
ABCA3Q99758 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC27.36■■□□□ 1.97
ABCA3Q99758 USF2-205ENST00000594064 1179 ntTSL 2 BASIC27.36■■□□□ 1.97
ABCA3Q99758 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC27.36■■□□□ 1.97
ABCA3Q99758 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
ABCA3Q99758 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
ABCA3Q99758 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ABCA3Q99758 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC27.35■■□□□ 1.97
ABCA3Q99758 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ABCA3Q99758 F2R-202ENST00000505600 442 ntTSL 2 BASIC27.35■■□□□ 1.97
ABCA3Q99758 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC27.35■■□□□ 1.97
ABCA3Q99758 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ABCA3Q99758 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ABCA3Q99758 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ABCA3Q99758 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
ABCA3Q99758 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ABCA3Q99758 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC27.34■■□□□ 1.97
ABCA3Q99758 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ABCA3Q99758 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC27.34■■□□□ 1.97
ABCA3Q99758 AC023632.3-201ENST00000521633 145 ntBASIC27.34■■□□□ 1.97
ABCA3Q99758 AC022616.7-201ENST00000525383 220 ntBASIC27.34■■□□□ 1.97
ABCA3Q99758 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC27.34■■□□□ 1.97
ABCA3Q99758 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC27.34■■□□□ 1.97
ABCA3Q99758 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ABCA3Q99758 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.34■■□□□ 1.97
ABCA3Q99758 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ABCA3Q99758 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ABCA3Q99758 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ABCA3Q99758 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC27.33■■□□□ 1.97
ABCA3Q99758 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ABCA3Q99758 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ABCA3Q99758 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ABCA3Q99758 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ABCA3Q99758 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC27.33■■□□□ 1.96
ABCA3Q99758 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC27.33■■□□□ 1.96
ABCA3Q99758 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC27.33■■□□□ 1.96
ABCA3Q99758 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
ABCA3Q99758 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.96
ABCA3Q99758 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.96
ABCA3Q99758 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
ABCA3Q99758 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ABCA3Q99758 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC27.32■■□□□ 1.96
ABCA3Q99758 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ABCA3Q99758 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ABCA3Q99758 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC27.32■■□□□ 1.96
ABCA3Q99758 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC27.32■■□□□ 1.96
ABCA3Q99758 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC27.32■■□□□ 1.96
ABCA3Q99758 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC27.32■■□□□ 1.96
ABCA3Q99758 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC27.32■■□□□ 1.96
ABCA3Q99758 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC27.32■■□□□ 1.96
ABCA3Q99758 AC010203.1-204ENST00000548782 407 ntBASIC27.32■■□□□ 1.96
ABCA3Q99758 MYC-208ENST00000641036 567 ntBASIC27.32■■□□□ 1.96
ABCA3Q99758 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC27.32■■□□□ 1.96
ABCA3Q99758 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
ABCA3Q99758 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ABCA3Q99758 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
ABCA3Q99758 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC27.31■■□□□ 1.96
ABCA3Q99758 METTL23-204ENST00000586752 904 ntTSL 2 BASIC27.31■■□□□ 1.96
ABCA3Q99758 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
ABCA3Q99758 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
ABCA3Q99758 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
ABCA3Q99758 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ABCA3Q99758 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC27.3■■□□□ 1.96
ABCA3Q99758 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
ABCA3Q99758 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
ABCA3Q99758 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
ABCA3Q99758 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
ABCA3Q99758 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
ABCA3Q99758 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC27.3■■□□□ 1.96
ABCA3Q99758 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
ABCA3Q99758 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC27.3■■□□□ 1.96
ABCA3Q99758 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC27.3■■□□□ 1.96
ABCA3Q99758 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC27.3■■□□□ 1.96
ABCA3Q99758 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC27.3■■□□□ 1.96
ABCA3Q99758 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC27.3■■□□□ 1.96
ABCA3Q99758 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
ABCA3Q99758 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
ABCA3Q99758 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC27.29■■□□□ 1.96
ABCA3Q99758 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms