Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LITAFQ99732 PODN-203ENST00000395871 2744 ntTSL 5 BASIC13.53□□□□□ -0.24
LITAFQ99732 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LITAFQ99732 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LITAFQ99732 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LITAFQ99732 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
LITAFQ99732 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC13.53□□□□□ -0.24
LITAFQ99732 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LITAFQ99732 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
LITAFQ99732 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LITAFQ99732 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LITAFQ99732 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LITAFQ99732 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LITAFQ99732 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LITAFQ99732 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC13.52□□□□□ -0.25
LITAFQ99732 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
LITAFQ99732 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC13.52□□□□□ -0.25
LITAFQ99732 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC13.52□□□□□ -0.25
LITAFQ99732 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC13.52□□□□□ -0.25
LITAFQ99732 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
LITAFQ99732 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
LITAFQ99732 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LITAFQ99732 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LITAFQ99732 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC13.52□□□□□ -0.25
LITAFQ99732 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LITAFQ99732 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LITAFQ99732 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
LITAFQ99732 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
LITAFQ99732 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LITAFQ99732 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC13.52□□□□□ -0.25
LITAFQ99732 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LITAFQ99732 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
LITAFQ99732 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LITAFQ99732 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LITAFQ99732 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC13.52□□□□□ -0.25
LITAFQ99732 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LITAFQ99732 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LITAFQ99732 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LITAFQ99732 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
LITAFQ99732 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LITAFQ99732 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LITAFQ99732 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LITAFQ99732 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LITAFQ99732 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LITAFQ99732 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LITAFQ99732 LINC01465-201ENST00000408887 1940 ntBASIC13.51□□□□□ -0.25
LITAFQ99732 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC13.51□□□□□ -0.25
LITAFQ99732 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LITAFQ99732 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LITAFQ99732 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LITAFQ99732 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LITAFQ99732 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.51□□□□□ -0.25
LITAFQ99732 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC13.51□□□□□ -0.25
LITAFQ99732 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LITAFQ99732 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LITAFQ99732 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LITAFQ99732 MIR3181-201ENST00000578512 73 ntBASIC13.51□□□□□ -0.25
LITAFQ99732 MTDHP2-201ENST00000601468 714 ntBASIC13.51□□□□□ -0.25
LITAFQ99732 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC13.51□□□□□ -0.25
LITAFQ99732 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LITAFQ99732 EXOG-217ENST00000630638 197 ntTSL 5 BASIC13.51□□□□□ -0.25
LITAFQ99732 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC13.51□□□□□ -0.25
LITAFQ99732 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LITAFQ99732 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LITAFQ99732 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LITAFQ99732 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LITAFQ99732 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LITAFQ99732 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LITAFQ99732 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LITAFQ99732 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LITAFQ99732 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LITAFQ99732 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LITAFQ99732 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LITAFQ99732 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LITAFQ99732 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LITAFQ99732 STK25-205ENST00000405883 1904 ntTSL 2 BASIC13.51□□□□□ -0.25
LITAFQ99732 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC13.5□□□□□ -0.25
LITAFQ99732 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LITAFQ99732 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
LITAFQ99732 STK25-204ENST00000405585 1643 ntTSL 2 BASIC13.5□□□□□ -0.25
LITAFQ99732 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
LITAFQ99732 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC13.5□□□□□ -0.25
LITAFQ99732 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LITAFQ99732 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
LITAFQ99732 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC13.5□□□□□ -0.25
LITAFQ99732 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LITAFQ99732 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LITAFQ99732 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC13.5□□□□□ -0.25
LITAFQ99732 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC13.5□□□□□ -0.25
LITAFQ99732 BX664725.1-201ENST00000438252 379 ntBASIC13.5□□□□□ -0.25
LITAFQ99732 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LITAFQ99732 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
LITAFQ99732 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
LITAFQ99732 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LITAFQ99732 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
LITAFQ99732 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LITAFQ99732 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LITAFQ99732 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LITAFQ99732 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC13.5□□□□□ -0.25
LITAFQ99732 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms