Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NOTCH4Q99466 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NOTCH4Q99466 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.12■□□□□ 0.97
NOTCH4Q99466 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.12■□□□□ 0.97
NOTCH4Q99466 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NOTCH4Q99466 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NOTCH4Q99466 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.12■□□□□ 0.97
NOTCH4Q99466 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
NOTCH4Q99466 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NOTCH4Q99466 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NOTCH4Q99466 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.12■□□□□ 0.97
NOTCH4Q99466 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NOTCH4Q99466 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.12■□□□□ 0.97
NOTCH4Q99466 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NOTCH4Q99466 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NOTCH4Q99466 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NOTCH4Q99466 PTBP1P-201ENST00000554374 1601 ntBASIC21.11■□□□□ 0.97
NOTCH4Q99466 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.11■□□□□ 0.97
NOTCH4Q99466 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NOTCH4Q99466 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NOTCH4Q99466 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NOTCH4Q99466 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NOTCH4Q99466 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NOTCH4Q99466 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NOTCH4Q99466 AC087499.1-201ENST00000418141 1075 ntBASIC21.11■□□□□ 0.97
NOTCH4Q99466 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NOTCH4Q99466 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.11■□□□□ 0.97
NOTCH4Q99466 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.11■□□□□ 0.97
NOTCH4Q99466 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NOTCH4Q99466 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
NOTCH4Q99466 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NOTCH4Q99466 KRT8P36-201ENST00000489121 1440 ntBASIC21.11■□□□□ 0.97
NOTCH4Q99466 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NOTCH4Q99466 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NOTCH4Q99466 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NOTCH4Q99466 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.11■□□□□ 0.97
NOTCH4Q99466 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NOTCH4Q99466 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NOTCH4Q99466 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NOTCH4Q99466 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.1■□□□□ 0.97
NOTCH4Q99466 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NOTCH4Q99466 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NOTCH4Q99466 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NOTCH4Q99466 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
NOTCH4Q99466 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NOTCH4Q99466 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.1■□□□□ 0.97
NOTCH4Q99466 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NOTCH4Q99466 AL135905.2-201ENST00000584934 1404 ntBASIC21.1■□□□□ 0.97
NOTCH4Q99466 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NOTCH4Q99466 AC011484.1-201ENST00000377652 1995 ntBASIC21.1■□□□□ 0.97
NOTCH4Q99466 AL390719.1-204ENST00000412397 1219 ntBASIC21.09■□□□□ 0.97
NOTCH4Q99466 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.09■□□□□ 0.97
NOTCH4Q99466 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.09■□□□□ 0.97
NOTCH4Q99466 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.09■□□□□ 0.97
NOTCH4Q99466 NUDT16P1-203ENST00000513809 620 ntBASIC21.09■□□□□ 0.97
NOTCH4Q99466 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.09■□□□□ 0.97
NOTCH4Q99466 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.09■□□□□ 0.97
NOTCH4Q99466 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.09■□□□□ 0.97
NOTCH4Q99466 Z98882.1-201ENST00000622160 2253 ntBASIC21.09■□□□□ 0.97
NOTCH4Q99466 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.09■□□□□ 0.97
NOTCH4Q99466 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
NOTCH4Q99466 AC244015.2-201ENST00000616358 1861 ntBASIC21.09■□□□□ 0.97
NOTCH4Q99466 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NOTCH4Q99466 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NOTCH4Q99466 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NOTCH4Q99466 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.09■□□□□ 0.97
NOTCH4Q99466 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NOTCH4Q99466 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.09■□□□□ 0.97
NOTCH4Q99466 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.09■□□□□ 0.97
NOTCH4Q99466 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.09■□□□□ 0.97
NOTCH4Q99466 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.09■□□□□ 0.97
NOTCH4Q99466 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
NOTCH4Q99466 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.09■□□□□ 0.97
NOTCH4Q99466 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.09■□□□□ 0.97
NOTCH4Q99466 MIR4785-201ENST00000585005 73 ntBASIC21.09■□□□□ 0.97
NOTCH4Q99466 AL121829.2-201ENST00000620908 328 ntBASIC21.09■□□□□ 0.97
NOTCH4Q99466 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.08■□□□□ 0.97
NOTCH4Q99466 KRT17P2-201ENST00000300992 1314 ntBASIC21.08■□□□□ 0.97
NOTCH4Q99466 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NOTCH4Q99466 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.97
NOTCH4Q99466 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.08■□□□□ 0.97
NOTCH4Q99466 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NOTCH4Q99466 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.08■□□□□ 0.97
NOTCH4Q99466 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
NOTCH4Q99466 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.08■□□□□ 0.97
NOTCH4Q99466 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.08■□□□□ 0.97
NOTCH4Q99466 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NOTCH4Q99466 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.08■□□□□ 0.97
NOTCH4Q99466 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.08■□□□□ 0.97
NOTCH4Q99466 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
NOTCH4Q99466 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
NOTCH4Q99466 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
NOTCH4Q99466 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
NOTCH4Q99466 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
NOTCH4Q99466 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NOTCH4Q99466 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NOTCH4Q99466 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.07■□□□□ 0.96
NOTCH4Q99466 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NOTCH4Q99466 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.07■□□□□ 0.96
NOTCH4Q99466 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms