Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PCDH15Q96QU1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH15Q96QU1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.96■□□□□ 0.79
PCDH15Q96QU1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.96■□□□□ 0.79
PCDH15Q96QU1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH15Q96QU1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDH15Q96QU1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH15Q96QU1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PCDH15Q96QU1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH15Q96QU1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH15Q96QU1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH15Q96QU1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH15Q96QU1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.95■□□□□ 0.78
PCDH15Q96QU1 MIR6786-201ENST00000616843 113 ntBASIC19.95■□□□□ 0.78
PCDH15Q96QU1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDH15Q96QU1 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH15Q96QU1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH15Q96QU1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH15Q96QU1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH15Q96QU1 KRT8P9-201ENST00000558927 1449 ntBASIC19.95■□□□□ 0.78
PCDH15Q96QU1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH15Q96QU1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH15Q96QU1 AL390719.1-204ENST00000412397 1219 ntBASIC19.95■□□□□ 0.78
PCDH15Q96QU1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDH15Q96QU1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.95■□□□□ 0.78
PCDH15Q96QU1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PCDH15Q96QU1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PCDH15Q96QU1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDH15Q96QU1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH15Q96QU1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH15Q96QU1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH15Q96QU1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDH15Q96QU1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH15Q96QU1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH15Q96QU1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH15Q96QU1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PCDH15Q96QU1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDH15Q96QU1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH15Q96QU1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH15Q96QU1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH15Q96QU1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PCDH15Q96QU1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.94■□□□□ 0.78
PCDH15Q96QU1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH15Q96QU1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH15Q96QU1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDH15Q96QU1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PCDH15Q96QU1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH15Q96QU1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH15Q96QU1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH15Q96QU1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.94■□□□□ 0.78
PCDH15Q96QU1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
PCDH15Q96QU1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
PCDH15Q96QU1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH15Q96QU1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH15Q96QU1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDH15Q96QU1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH15Q96QU1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH15Q96QU1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PCDH15Q96QU1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH15Q96QU1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH15Q96QU1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDH15Q96QU1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PCDH15Q96QU1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PCDH15Q96QU1 AF186192.3-201ENST00000583427 947 ntBASIC19.93■□□□□ 0.78
PCDH15Q96QU1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PCDH15Q96QU1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH15Q96QU1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH15Q96QU1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDH15Q96QU1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH15Q96QU1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDH15Q96QU1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH15Q96QU1 KRT16P5-201ENST00000455284 522 ntBASIC19.92■□□□□ 0.78
PCDH15Q96QU1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.92■□□□□ 0.78
PCDH15Q96QU1 AL121829.2-201ENST00000620908 328 ntBASIC19.92■□□□□ 0.78
PCDH15Q96QU1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH15Q96QU1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PCDH15Q96QU1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH15Q96QU1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH15Q96QU1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH15Q96QU1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH15Q96QU1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH15Q96QU1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH15Q96QU1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH15Q96QU1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDH15Q96QU1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH15Q96QU1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH15Q96QU1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDH15Q96QU1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH15Q96QU1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PCDH15Q96QU1 AL353807.1-201ENST00000427475 662 ntBASIC19.92■□□□□ 0.78
PCDH15Q96QU1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDH15Q96QU1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH15Q96QU1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH15Q96QU1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH15Q96QU1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDH15Q96QU1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH15Q96QU1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDH15Q96QU1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PCDH15Q96QU1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH15Q96QU1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms