Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC24.08■■□□□ 1.45
NEK1Q96PY6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
NEK1Q96PY6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC24.08■■□□□ 1.45
NEK1Q96PY6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
NEK1Q96PY6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
NEK1Q96PY6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC24.08■■□□□ 1.45
NEK1Q96PY6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC24.08■■□□□ 1.44
NEK1Q96PY6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC24.07■■□□□ 1.44
NEK1Q96PY6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
NEK1Q96PY6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
NEK1Q96PY6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC24.07■■□□□ 1.44
NEK1Q96PY6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
NEK1Q96PY6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
NEK1Q96PY6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC24.07■■□□□ 1.44
NEK1Q96PY6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC24.07■■□□□ 1.44
NEK1Q96PY6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
NEK1Q96PY6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
NEK1Q96PY6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC24.07■■□□□ 1.44
NEK1Q96PY6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
NEK1Q96PY6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
NEK1Q96PY6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
NEK1Q96PY6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
NEK1Q96PY6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
NEK1Q96PY6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC24.07■■□□□ 1.44
NEK1Q96PY6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
NEK1Q96PY6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC24.07■■□□□ 1.44
NEK1Q96PY6 AC005181.1-201ENST00000604782 1256 ntBASIC24.07■■□□□ 1.44
NEK1Q96PY6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC24.07■■□□□ 1.44
NEK1Q96PY6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC24.07■■□□□ 1.44
NEK1Q96PY6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC24.07■■□□□ 1.44
NEK1Q96PY6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
NEK1Q96PY6 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
NEK1Q96PY6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NEK1Q96PY6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
NEK1Q96PY6 MCRIP2P1-201ENST00000394346 511 ntBASIC24.06■■□□□ 1.44
NEK1Q96PY6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC24.06■■□□□ 1.44
NEK1Q96PY6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC24.06■■□□□ 1.44
NEK1Q96PY6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NEK1Q96PY6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
NEK1Q96PY6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC24.06■■□□□ 1.44
NEK1Q96PY6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
NEK1Q96PY6 AC008694.1-202ENST00000636953 945 ntBASIC24.06■■□□□ 1.44
NEK1Q96PY6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
NEK1Q96PY6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NEK1Q96PY6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NEK1Q96PY6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
NEK1Q96PY6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
NEK1Q96PY6 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC24.06■■□□□ 1.44
NEK1Q96PY6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC24.06■■□□□ 1.44
NEK1Q96PY6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NEK1Q96PY6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NEK1Q96PY6 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NEK1Q96PY6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NEK1Q96PY6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
NEK1Q96PY6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC24.05■■□□□ 1.44
NEK1Q96PY6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NEK1Q96PY6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
NEK1Q96PY6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NEK1Q96PY6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NEK1Q96PY6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC24.05■■□□□ 1.44
NEK1Q96PY6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
NEK1Q96PY6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NEK1Q96PY6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC24.05■■□□□ 1.44
NEK1Q96PY6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.05■■□□□ 1.44
NEK1Q96PY6 OR10C1-204ENST00000622521 1039 ntBASIC24.05■■□□□ 1.44
NEK1Q96PY6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
NEK1Q96PY6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
NEK1Q96PY6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NEK1Q96PY6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NEK1Q96PY6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
NEK1Q96PY6 SMG8-203ENST00000578922 2178 ntBASIC24.04■■□□□ 1.44
NEK1Q96PY6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
NEK1Q96PY6 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC24.04■■□□□ 1.44
NEK1Q96PY6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC24.04■■□□□ 1.44
NEK1Q96PY6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC24.04■■□□□ 1.44
NEK1Q96PY6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NEK1Q96PY6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NEK1Q96PY6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC24.04■■□□□ 1.44
NEK1Q96PY6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC24.04■■□□□ 1.44
NEK1Q96PY6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC24.04■■□□□ 1.44
NEK1Q96PY6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC24.04■■□□□ 1.44
NEK1Q96PY6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
NEK1Q96PY6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
NEK1Q96PY6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NEK1Q96PY6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
NEK1Q96PY6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC24.03■■□□□ 1.44
NEK1Q96PY6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NEK1Q96PY6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC24.03■■□□□ 1.44
NEK1Q96PY6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC24.03■■□□□ 1.44
NEK1Q96PY6 RAP2CP1-201ENST00000605103 478 ntBASIC24.03■■□□□ 1.44
NEK1Q96PY6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
NEK1Q96PY6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NEK1Q96PY6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC24.03■■□□□ 1.44
NEK1Q96PY6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NEK1Q96PY6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NEK1Q96PY6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NEK1Q96PY6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC24.03■■□□□ 1.44
NEK1Q96PY6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
NEK1Q96PY6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC24.02■■□□□ 1.44
NEK1Q96PY6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms