Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.89■□□□□ 0.77
PDLIM5Q96HC4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.89■□□□□ 0.77
PDLIM5Q96HC4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM5Q96HC4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM5Q96HC4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.89■□□□□ 0.77
PDLIM5Q96HC4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
PDLIM5Q96HC4 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.89■□□□□ 0.77
PDLIM5Q96HC4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PDLIM5Q96HC4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM5Q96HC4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM5Q96HC4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM5Q96HC4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM5Q96HC4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM5Q96HC4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM5Q96HC4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.88■□□□□ 0.77
PDLIM5Q96HC4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM5Q96HC4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM5Q96HC4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PDLIM5Q96HC4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.88■□□□□ 0.77
PDLIM5Q96HC4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.88■□□□□ 0.77
PDLIM5Q96HC4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.88■□□□□ 0.77
PDLIM5Q96HC4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.88■□□□□ 0.77
PDLIM5Q96HC4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.88■□□□□ 0.77
PDLIM5Q96HC4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM5Q96HC4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.88■□□□□ 0.77
PDLIM5Q96HC4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM5Q96HC4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM5Q96HC4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM5Q96HC4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.87■□□□□ 0.77
PDLIM5Q96HC4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PDLIM5Q96HC4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM5Q96HC4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM5Q96HC4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.87■□□□□ 0.77
PDLIM5Q96HC4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.87■□□□□ 0.77
PDLIM5Q96HC4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PDLIM5Q96HC4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.87■□□□□ 0.77
PDLIM5Q96HC4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
PDLIM5Q96HC4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM5Q96HC4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM5Q96HC4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM5Q96HC4 SMG8-203ENST00000578922 2178 ntBASIC19.87■□□□□ 0.77
PDLIM5Q96HC4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.87■□□□□ 0.77
PDLIM5Q96HC4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM5Q96HC4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM5Q96HC4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.86■□□□□ 0.77
PDLIM5Q96HC4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.86■□□□□ 0.77
PDLIM5Q96HC4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDLIM5Q96HC4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDLIM5Q96HC4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDLIM5Q96HC4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.86■□□□□ 0.77
PDLIM5Q96HC4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDLIM5Q96HC4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PDLIM5Q96HC4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PDLIM5Q96HC4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDLIM5Q96HC4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDLIM5Q96HC4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
PDLIM5Q96HC4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
PDLIM5Q96HC4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDLIM5Q96HC4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDLIM5Q96HC4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.85■□□□□ 0.77
PDLIM5Q96HC4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDLIM5Q96HC4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.85■□□□□ 0.77
PDLIM5Q96HC4 DPP3P2-201ENST00000416030 1696 ntBASIC19.85■□□□□ 0.77
PDLIM5Q96HC4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PDLIM5Q96HC4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDLIM5Q96HC4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDLIM5Q96HC4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.85■□□□□ 0.77
PDLIM5Q96HC4 AC007322.1-201ENST00000426983 750 ntBASIC19.85■□□□□ 0.77
PDLIM5Q96HC4 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.85■□□□□ 0.77
PDLIM5Q96HC4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
PDLIM5Q96HC4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDLIM5Q96HC4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.85■□□□□ 0.77
PDLIM5Q96HC4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.85■□□□□ 0.77
PDLIM5Q96HC4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.85■□□□□ 0.77
PDLIM5Q96HC4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PDLIM5Q96HC4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.85■□□□□ 0.77
PDLIM5Q96HC4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.85■□□□□ 0.77
PDLIM5Q96HC4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDLIM5Q96HC4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDLIM5Q96HC4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDLIM5Q96HC4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.84■□□□□ 0.77
PDLIM5Q96HC4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDLIM5Q96HC4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PDLIM5Q96HC4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PDLIM5Q96HC4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDLIM5Q96HC4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
PDLIM5Q96HC4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.84■□□□□ 0.77
PDLIM5Q96HC4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDLIM5Q96HC4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PDLIM5Q96HC4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDLIM5Q96HC4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PDLIM5Q96HC4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.84■□□□□ 0.77
PDLIM5Q96HC4 AC069236.1-201ENST00000604339 616 ntBASIC19.84■□□□□ 0.77
PDLIM5Q96HC4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.84■□□□□ 0.77
PDLIM5Q96HC4 OR10C1-204ENST00000622521 1039 ntBASIC19.84■□□□□ 0.77
PDLIM5Q96HC4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.84■□□□□ 0.77
PDLIM5Q96HC4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PDLIM5Q96HC4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PDLIM5Q96HC4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDLIM5Q96HC4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms