Protein–RNA interactions for Protein: Q96DZ5

CLIP3, CAP-Gly domain-containing linker protein 3, humanhuman

Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3Q96DZ5 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.54■□□□□ 0.72
CLIP3Q96DZ5 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.54■□□□□ 0.72
CLIP3Q96DZ5 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CLIP3Q96DZ5 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.54■□□□□ 0.72
CLIP3Q96DZ5 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLIP3Q96DZ5 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.54■□□□□ 0.72
CLIP3Q96DZ5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
CLIP3Q96DZ5 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLIP3Q96DZ5 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CLIP3Q96DZ5 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.53■□□□□ 0.72
CLIP3Q96DZ5 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CLIP3Q96DZ5 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.53■□□□□ 0.72
CLIP3Q96DZ5 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.53■□□□□ 0.72
CLIP3Q96DZ5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLIP3Q96DZ5 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLIP3Q96DZ5 AC073130.3-201ENST00000624389 2278 ntBASIC19.53■□□□□ 0.72
CLIP3Q96DZ5 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.53■□□□□ 0.72
CLIP3Q96DZ5 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLIP3Q96DZ5 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLIP3Q96DZ5 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLIP3Q96DZ5 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CLIP3Q96DZ5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLIP3Q96DZ5 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLIP3Q96DZ5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLIP3Q96DZ5 Z98882.1-201ENST00000622160 2253 ntBASIC19.53■□□□□ 0.72
CLIP3Q96DZ5 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLIP3Q96DZ5 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLIP3Q96DZ5 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLIP3Q96DZ5 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.52■□□□□ 0.72
CLIP3Q96DZ5 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLIP3Q96DZ5 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLIP3Q96DZ5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CLIP3Q96DZ5 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLIP3Q96DZ5 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLIP3Q96DZ5 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.52■□□□□ 0.72
CLIP3Q96DZ5 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.52■□□□□ 0.72
CLIP3Q96DZ5 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.52■□□□□ 0.72
CLIP3Q96DZ5 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.52■□□□□ 0.72
CLIP3Q96DZ5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CLIP3Q96DZ5 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.52■□□□□ 0.72
CLIP3Q96DZ5 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.52■□□□□ 0.72
CLIP3Q96DZ5 CYP21A1P-202ENST00000354927 1481 ntBASIC19.52■□□□□ 0.72
CLIP3Q96DZ5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLIP3Q96DZ5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLIP3Q96DZ5 AC007375.3-201ENST00000600936 2314 ntBASIC19.52■□□□□ 0.71
CLIP3Q96DZ5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLIP3Q96DZ5 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIP3Q96DZ5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLIP3Q96DZ5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLIP3Q96DZ5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLIP3Q96DZ5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.51■□□□□ 0.71
CLIP3Q96DZ5 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIP3Q96DZ5 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.51■□□□□ 0.71
CLIP3Q96DZ5 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.51■□□□□ 0.71
CLIP3Q96DZ5 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
CLIP3Q96DZ5 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.51■□□□□ 0.71
CLIP3Q96DZ5 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLIP3Q96DZ5 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLIP3Q96DZ5 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.51■□□□□ 0.71
CLIP3Q96DZ5 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CLIP3Q96DZ5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLIP3Q96DZ5 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIP3Q96DZ5 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.51■□□□□ 0.71
CLIP3Q96DZ5 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIP3Q96DZ5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CLIP3Q96DZ5 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIP3Q96DZ5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIP3Q96DZ5 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.51■□□□□ 0.71
CLIP3Q96DZ5 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLIP3Q96DZ5 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIP3Q96DZ5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CLIP3Q96DZ5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.5■□□□□ 0.71
CLIP3Q96DZ5 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIP3Q96DZ5 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIP3Q96DZ5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIP3Q96DZ5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIP3Q96DZ5 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIP3Q96DZ5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIP3Q96DZ5 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIP3Q96DZ5 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIP3Q96DZ5 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLIP3Q96DZ5 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIP3Q96DZ5 ESRRAP1-201ENST00000400596 1257 ntBASIC19.5■□□□□ 0.71
CLIP3Q96DZ5 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
CLIP3Q96DZ5 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.5■□□□□ 0.71
CLIP3Q96DZ5 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.5■□□□□ 0.71
CLIP3Q96DZ5 ITM2C-210ENST00000620962 501 ntBASIC19.5■□□□□ 0.71
CLIP3Q96DZ5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLIP3Q96DZ5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CLIP3Q96DZ5 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CLIP3Q96DZ5 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIP3Q96DZ5 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIP3Q96DZ5 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIP3Q96DZ5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIP3Q96DZ5 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CLIP3Q96DZ5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLIP3Q96DZ5 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CLIP3Q96DZ5 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIP3Q96DZ5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.49■□□□□ 0.71
CLIP3Q96DZ5 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms