Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FOXRED1Q96CU9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
FOXRED1Q96CU9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FOXRED1Q96CU9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FOXRED1Q96CU9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.61■□□□□ 0.41
FOXRED1Q96CU9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
FOXRED1Q96CU9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
FOXRED1Q96CU9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.61■□□□□ 0.41
FOXRED1Q96CU9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.6■□□□□ 0.41
FOXRED1Q96CU9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.6■□□□□ 0.41
FOXRED1Q96CU9 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.6■□□□□ 0.41
FOXRED1Q96CU9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FOXRED1Q96CU9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FOXRED1Q96CU9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXRED1Q96CU9 MIR935-201ENST00000401179 91 ntBASIC17.6■□□□□ 0.41
FOXRED1Q96CU9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FOXRED1Q96CU9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.6■□□□□ 0.41
FOXRED1Q96CU9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.6■□□□□ 0.41
FOXRED1Q96CU9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.6■□□□□ 0.41
FOXRED1Q96CU9 AC120498.10-201ENST00000621827 505 ntBASIC17.6■□□□□ 0.41
FOXRED1Q96CU9 KRT16P2-201ENST00000414673 1423 ntBASIC17.6■□□□□ 0.41
FOXRED1Q96CU9 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FOXRED1Q96CU9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXRED1Q96CU9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
FOXRED1Q96CU9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.6■□□□□ 0.41
FOXRED1Q96CU9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FOXRED1Q96CU9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXRED1Q96CU9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXRED1Q96CU9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXRED1Q96CU9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
FOXRED1Q96CU9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXRED1Q96CU9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXRED1Q96CU9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.59■□□□□ 0.41
FOXRED1Q96CU9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXRED1Q96CU9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.59■□□□□ 0.41
FOXRED1Q96CU9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.59■□□□□ 0.41
FOXRED1Q96CU9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FOXRED1Q96CU9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXRED1Q96CU9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
FOXRED1Q96CU9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXRED1Q96CU9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXRED1Q96CU9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXRED1Q96CU9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXRED1Q96CU9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.59■□□□□ 0.41
FOXRED1Q96CU9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.59■□□□□ 0.41
FOXRED1Q96CU9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXRED1Q96CU9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FOXRED1Q96CU9 RARRES2P11-201ENST00000635158 484 ntBASIC17.59■□□□□ 0.41
FOXRED1Q96CU9 MIR2861-201ENST00000636310 90 ntBASIC17.59■□□□□ 0.41
FOXRED1Q96CU9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXRED1Q96CU9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXRED1Q96CU9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXRED1Q96CU9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FOXRED1Q96CU9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.59■□□□□ 0.41
FOXRED1Q96CU9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
FOXRED1Q96CU9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
FOXRED1Q96CU9 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.58■□□□□ 0.41
FOXRED1Q96CU9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
FOXRED1Q96CU9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
FOXRED1Q96CU9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.58■□□□□ 0.41
FOXRED1Q96CU9 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
FOXRED1Q96CU9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
FOXRED1Q96CU9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
FOXRED1Q96CU9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FOXRED1Q96CU9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
FOXRED1Q96CU9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXRED1Q96CU9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXRED1Q96CU9 AC027612.3-201ENST00000413684 1047 ntBASIC17.58■□□□□ 0.4
FOXRED1Q96CU9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.58■□□□□ 0.4
FOXRED1Q96CU9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.58■□□□□ 0.4
FOXRED1Q96CU9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.58■□□□□ 0.4
FOXRED1Q96CU9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXRED1Q96CU9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.58■□□□□ 0.4
FOXRED1Q96CU9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXRED1Q96CU9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXRED1Q96CU9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXRED1Q96CU9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXRED1Q96CU9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
FOXRED1Q96CU9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
FOXRED1Q96CU9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.58■□□□□ 0.4
FOXRED1Q96CU9 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXRED1Q96CU9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXRED1Q96CU9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXRED1Q96CU9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXRED1Q96CU9 SMG8-203ENST00000578922 2178 ntBASIC17.57■□□□□ 0.4
FOXRED1Q96CU9 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
FOXRED1Q96CU9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.57■□□□□ 0.4
FOXRED1Q96CU9 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
FOXRED1Q96CU9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXRED1Q96CU9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
FOXRED1Q96CU9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXRED1Q96CU9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXRED1Q96CU9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.57■□□□□ 0.4
FOXRED1Q96CU9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
FOXRED1Q96CU9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXRED1Q96CU9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
FOXRED1Q96CU9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXRED1Q96CU9 AC116050.2-201ENST00000612102 1779 ntBASIC17.57■□□□□ 0.4
FOXRED1Q96CU9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.57■□□□□ 0.4
FOXRED1Q96CU9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms