Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.79■□□□□ 0.76
RHBDF1Q96CC6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDF1Q96CC6 AC087633.2-202ENST00000565166 1439 ntBASIC19.79■□□□□ 0.76
RHBDF1Q96CC6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RHBDF1Q96CC6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RHBDF1Q96CC6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDF1Q96CC6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.79■□□□□ 0.76
RHBDF1Q96CC6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDF1Q96CC6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.79■□□□□ 0.76
RHBDF1Q96CC6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RHBDF1Q96CC6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.79■□□□□ 0.76
RHBDF1Q96CC6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDF1Q96CC6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDF1Q96CC6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDF1Q96CC6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHBDF1Q96CC6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHBDF1Q96CC6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHBDF1Q96CC6 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.78■□□□□ 0.76
RHBDF1Q96CC6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.78■□□□□ 0.76
RHBDF1Q96CC6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHBDF1Q96CC6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHBDF1Q96CC6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.78■□□□□ 0.76
RHBDF1Q96CC6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHBDF1Q96CC6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.78■□□□□ 0.76
RHBDF1Q96CC6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RHBDF1Q96CC6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHBDF1Q96CC6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RHBDF1Q96CC6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.78■□□□□ 0.76
RHBDF1Q96CC6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHBDF1Q96CC6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHBDF1Q96CC6 AC099778.1-201ENST00000568593 1911 ntBASIC19.78■□□□□ 0.76
RHBDF1Q96CC6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHBDF1Q96CC6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHBDF1Q96CC6 AL391422.3-201ENST00000603791 2761 ntBASIC19.78■□□□□ 0.76
RHBDF1Q96CC6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RHBDF1Q96CC6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RHBDF1Q96CC6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RHBDF1Q96CC6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.77■□□□□ 0.76
RHBDF1Q96CC6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RHBDF1Q96CC6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RHBDF1Q96CC6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RHBDF1Q96CC6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RHBDF1Q96CC6 PGM5P4-201ENST00000421970 445 ntBASIC19.77■□□□□ 0.76
RHBDF1Q96CC6 RARRES2P4-201ENST00000514074 484 ntBASIC19.77■□□□□ 0.76
RHBDF1Q96CC6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.77■□□□□ 0.76
RHBDF1Q96CC6 AL356652.1-201ENST00000615962 565 ntBASIC19.77■□□□□ 0.76
RHBDF1Q96CC6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.77■□□□□ 0.76
RHBDF1Q96CC6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.77■□□□□ 0.76
RHBDF1Q96CC6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RHBDF1Q96CC6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.77■□□□□ 0.76
RHBDF1Q96CC6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RHBDF1Q96CC6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
RHBDF1Q96CC6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
RHBDF1Q96CC6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDF1Q96CC6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDF1Q96CC6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
RHBDF1Q96CC6 SMG8-203ENST00000578922 2178 ntBASIC19.76■□□□□ 0.75
RHBDF1Q96CC6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.76■□□□□ 0.75
RHBDF1Q96CC6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDF1Q96CC6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDF1Q96CC6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.76■□□□□ 0.75
RHBDF1Q96CC6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.76■□□□□ 0.75
RHBDF1Q96CC6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.76■□□□□ 0.75
RHBDF1Q96CC6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.76■□□□□ 0.75
RHBDF1Q96CC6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RHBDF1Q96CC6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDF1Q96CC6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RHBDF1Q96CC6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDF1Q96CC6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDF1Q96CC6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RHBDF1Q96CC6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDF1Q96CC6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RHBDF1Q96CC6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDF1Q96CC6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RHBDF1Q96CC6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDF1Q96CC6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDF1Q96CC6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.75■□□□□ 0.75
RHBDF1Q96CC6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RHBDF1Q96CC6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDF1Q96CC6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RHBDF1Q96CC6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDF1Q96CC6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDF1Q96CC6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDF1Q96CC6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.75■□□□□ 0.75
RHBDF1Q96CC6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
RHBDF1Q96CC6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RHBDF1Q96CC6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.75■□□□□ 0.75
RHBDF1Q96CC6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDF1Q96CC6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.75■□□□□ 0.75
RHBDF1Q96CC6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.75■□□□□ 0.75
RHBDF1Q96CC6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.75■□□□□ 0.75
RHBDF1Q96CC6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDF1Q96CC6 AC231657.2-201ENST00000624556 255 ntBASIC19.75■□□□□ 0.75
RHBDF1Q96CC6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.75■□□□□ 0.75
RHBDF1Q96CC6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RHBDF1Q96CC6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDF1Q96CC6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDF1Q96CC6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDF1Q96CC6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RHBDF1Q96CC6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms