Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTP4A1Q93096 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.22■□□□□ 0.51
PTP4A1Q93096 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTP4A1Q93096 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTP4A1Q93096 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.22■□□□□ 0.51
PTP4A1Q93096 AC125437.2-201ENST00000625180 2167 ntBASIC18.22■□□□□ 0.51
PTP4A1Q93096 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTP4A1Q93096 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTP4A1Q93096 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.22■□□□□ 0.51
PTP4A1Q93096 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTP4A1Q93096 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTP4A1Q93096 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.22■□□□□ 0.51
PTP4A1Q93096 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTP4A1Q93096 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.21■□□□□ 0.51
PTP4A1Q93096 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTP4A1Q93096 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
PTP4A1Q93096 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PTP4A1Q93096 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTP4A1Q93096 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.21■□□□□ 0.51
PTP4A1Q93096 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.21■□□□□ 0.51
PTP4A1Q93096 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.21■□□□□ 0.51
PTP4A1Q93096 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.21■□□□□ 0.51
PTP4A1Q93096 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTP4A1Q93096 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.21■□□□□ 0.51
PTP4A1Q93096 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.21■□□□□ 0.51
PTP4A1Q93096 DUX4L2-201ENST00000561772 1275 ntBASIC18.21■□□□□ 0.51
PTP4A1Q93096 AC104187.1-201ENST00000607510 612 ntBASIC18.21■□□□□ 0.51
PTP4A1Q93096 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
PTP4A1Q93096 DUX4L6-201ENST00000626483 1275 ntBASIC18.21■□□□□ 0.51
PTP4A1Q93096 DUX4L1-201ENST00000627662 1275 ntBASIC18.21■□□□□ 0.51
PTP4A1Q93096 DUX4L8-201ENST00000629013 1275 ntBASIC18.21■□□□□ 0.51
PTP4A1Q93096 DUX4L3-201ENST00000630187 1275 ntBASIC18.21■□□□□ 0.51
PTP4A1Q93096 DUX4L7-201ENST00000630678 1275 ntBASIC18.21■□□□□ 0.51
PTP4A1Q93096 DUX4L5-201ENST00000630834 1275 ntBASIC18.21■□□□□ 0.51
PTP4A1Q93096 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTP4A1Q93096 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
PTP4A1Q93096 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTP4A1Q93096 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTP4A1Q93096 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTP4A1Q93096 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PTP4A1Q93096 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.21■□□□□ 0.51
PTP4A1Q93096 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTP4A1Q93096 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTP4A1Q93096 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
PTP4A1Q93096 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
PTP4A1Q93096 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTP4A1Q93096 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.2■□□□□ 0.5
PTP4A1Q93096 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTP4A1Q93096 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTP4A1Q93096 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTP4A1Q93096 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTP4A1Q93096 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PTP4A1Q93096 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTP4A1Q93096 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.2■□□□□ 0.5
PTP4A1Q93096 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTP4A1Q93096 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTP4A1Q93096 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.2■□□□□ 0.5
PTP4A1Q93096 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.2■□□□□ 0.5
PTP4A1Q93096 AP001160.3-201ENST00000601484 763 ntBASIC18.2■□□□□ 0.5
PTP4A1Q93096 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTP4A1Q93096 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.2■□□□□ 0.5
PTP4A1Q93096 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.2■□□□□ 0.5
PTP4A1Q93096 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PTP4A1Q93096 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PTP4A1Q93096 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTP4A1Q93096 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTP4A1Q93096 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTP4A1Q93096 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTP4A1Q93096 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTP4A1Q93096 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.19■□□□□ 0.5
PTP4A1Q93096 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTP4A1Q93096 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.19■□□□□ 0.5
PTP4A1Q93096 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTP4A1Q93096 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTP4A1Q93096 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
PTP4A1Q93096 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.19■□□□□ 0.5
PTP4A1Q93096 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.19■□□□□ 0.5
PTP4A1Q93096 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.19■□□□□ 0.5
PTP4A1Q93096 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTP4A1Q93096 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PTP4A1Q93096 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.19■□□□□ 0.5
PTP4A1Q93096 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.19■□□□□ 0.5
PTP4A1Q93096 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.19■□□□□ 0.5
PTP4A1Q93096 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTP4A1Q93096 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PTP4A1Q93096 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTP4A1Q93096 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.19■□□□□ 0.5
PTP4A1Q93096 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PTP4A1Q93096 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTP4A1Q93096 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTP4A1Q93096 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTP4A1Q93096 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.18■□□□□ 0.5
PTP4A1Q93096 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTP4A1Q93096 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTP4A1Q93096 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTP4A1Q93096 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTP4A1Q93096 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.18■□□□□ 0.5
PTP4A1Q93096 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PTP4A1Q93096 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.18■□□□□ 0.5
PTP4A1Q93096 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms