Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.03■□□□□ 0.8
USP7Q93009 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.03■□□□□ 0.8
USP7Q93009 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
USP7Q93009 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.03■□□□□ 0.8
USP7Q93009 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP7Q93009 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.03■□□□□ 0.8
USP7Q93009 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.03■□□□□ 0.8
USP7Q93009 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP7Q93009 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.03■□□□□ 0.8
USP7Q93009 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.03■□□□□ 0.8
USP7Q93009 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP7Q93009 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
USP7Q93009 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP7Q93009 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP7Q93009 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP7Q93009 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.03■□□□□ 0.8
USP7Q93009 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP7Q93009 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.02■□□□□ 0.8
USP7Q93009 LINC01006-201ENST00000333319 2292 ntBASIC20.02■□□□□ 0.8
USP7Q93009 AC073130.3-201ENST00000624389 2278 ntBASIC20.02■□□□□ 0.8
USP7Q93009 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
USP7Q93009 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP7Q93009 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP7Q93009 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
USP7Q93009 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP7Q93009 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP7Q93009 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP7Q93009 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP7Q93009 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP7Q93009 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.02■□□□□ 0.8
USP7Q93009 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.02■□□□□ 0.8
USP7Q93009 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.02■□□□□ 0.8
USP7Q93009 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP7Q93009 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP7Q93009 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP7Q93009 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP7Q93009 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP7Q93009 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
USP7Q93009 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
USP7Q93009 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
USP7Q93009 AC010980.2-201ENST00000587099 1412 ntBASIC20.02■□□□□ 0.79
USP7Q93009 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
USP7Q93009 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP7Q93009 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
USP7Q93009 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP7Q93009 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.01■□□□□ 0.79
USP7Q93009 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP7Q93009 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP7Q93009 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP7Q93009 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP7Q93009 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP7Q93009 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.01■□□□□ 0.79
USP7Q93009 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
USP7Q93009 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP7Q93009 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.01■□□□□ 0.79
USP7Q93009 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.01■□□□□ 0.79
USP7Q93009 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.01■□□□□ 0.79
USP7Q93009 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP7Q93009 MYC-209ENST00000641252 345 ntBASIC20.01■□□□□ 0.79
USP7Q93009 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
USP7Q93009 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
USP7Q93009 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
USP7Q93009 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP7Q93009 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP7Q93009 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP7Q93009 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20■□□□□ 0.79
USP7Q93009 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20■□□□□ 0.79
USP7Q93009 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20■□□□□ 0.79
USP7Q93009 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
USP7Q93009 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20■□□□□ 0.79
USP7Q93009 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20■□□□□ 0.79
USP7Q93009 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20■□□□□ 0.79
USP7Q93009 AL162412.1-201ENST00000567129 965 ntBASIC20■□□□□ 0.79
USP7Q93009 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP7Q93009 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
USP7Q93009 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20■□□□□ 0.79
USP7Q93009 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP7Q93009 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20■□□□□ 0.79
USP7Q93009 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
USP7Q93009 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
USP7Q93009 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
USP7Q93009 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
USP7Q93009 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20■□□□□ 0.79
USP7Q93009 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
USP7Q93009 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USP7Q93009 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.99■□□□□ 0.79
USP7Q93009 AP005212.1-201ENST00000581547 1997 ntBASIC19.99■□□□□ 0.79
USP7Q93009 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP7Q93009 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
USP7Q93009 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USP7Q93009 ESRRAP1-201ENST00000400596 1257 ntBASIC19.99■□□□□ 0.79
USP7Q93009 AC091874.3-201ENST00000512672 1195 ntBASIC19.99■□□□□ 0.79
USP7Q93009 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.99■□□□□ 0.79
USP7Q93009 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.99■□□□□ 0.79
USP7Q93009 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USP7Q93009 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USP7Q93009 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.99■□□□□ 0.79
USP7Q93009 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
USP7Q93009 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP7Q93009 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms