Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 AL590326.2-201ENST00000625139 305 ntBASIC26.16■■□□□ 1.78
SMARCC1Q92922 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC26.16■■□□□ 1.78
SMARCC1Q92922 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCC1Q92922 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCC1Q92922 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCC1Q92922 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC26.16■■□□□ 1.78
SMARCC1Q92922 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCC1Q92922 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCC1Q92922 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCC1Q92922 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC26.16■■□□□ 1.78
SMARCC1Q92922 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
SMARCC1Q92922 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC26.15■■□□□ 1.78
SMARCC1Q92922 ARMC10P1-201ENST00000313754 855 ntBASIC26.15■■□□□ 1.78
SMARCC1Q92922 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SMARCC1Q92922 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC26.15■■□□□ 1.78
SMARCC1Q92922 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC26.15■■□□□ 1.78
SMARCC1Q92922 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC26.15■■□□□ 1.78
SMARCC1Q92922 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
SMARCC1Q92922 FDX2-207ENST00000494368 584 ntTSL 4 BASIC26.15■■□□□ 1.78
SMARCC1Q92922 F2R-202ENST00000505600 442 ntTSL 2 BASIC26.15■■□□□ 1.78
SMARCC1Q92922 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC26.15■■□□□ 1.78
SMARCC1Q92922 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SMARCC1Q92922 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC26.14■■□□□ 1.78
SMARCC1Q92922 TREX2-204ENST00000370212 861 ntTSL 5 BASIC26.14■■□□□ 1.78
SMARCC1Q92922 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
SMARCC1Q92922 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
SMARCC1Q92922 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SMARCC1Q92922 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SMARCC1Q92922 RBM17P1-201ENST00000453646 1190 ntBASIC26.14■■□□□ 1.78
SMARCC1Q92922 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC26.14■■□□□ 1.78
SMARCC1Q92922 MIR6786-201ENST00000616843 113 ntBASIC26.14■■□□□ 1.78
SMARCC1Q92922 AC005363.2-201ENST00000618631 242 ntBASIC26.14■■□□□ 1.78
SMARCC1Q92922 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SMARCC1Q92922 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.14■■□□□ 1.77
SMARCC1Q92922 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
SMARCC1Q92922 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC26.14■■□□□ 1.77
SMARCC1Q92922 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC26.14■■□□□ 1.77
SMARCC1Q92922 GOLGA2P6-201ENST00000340929 2049 ntBASIC26.14■■□□□ 1.77
SMARCC1Q92922 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC26.14■■□□□ 1.77
SMARCC1Q92922 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
SMARCC1Q92922 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
SMARCC1Q92922 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SMARCC1Q92922 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC26.13■■□□□ 1.77
SMARCC1Q92922 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC26.13■■□□□ 1.77
SMARCC1Q92922 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SMARCC1Q92922 NUDT16P1-203ENST00000513809 620 ntBASIC26.13■■□□□ 1.77
SMARCC1Q92922 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SMARCC1Q92922 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC26.13■■□□□ 1.77
SMARCC1Q92922 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SMARCC1Q92922 AL049597.2-201ENST00000565575 961 ntBASIC26.13■■□□□ 1.77
SMARCC1Q92922 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC26.13■■□□□ 1.77
SMARCC1Q92922 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SMARCC1Q92922 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC26.13■■□□□ 1.77
SMARCC1Q92922 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SMARCC1Q92922 STK25-205ENST00000405883 1904 ntTSL 2 BASIC26.12■■□□□ 1.77
SMARCC1Q92922 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SMARCC1Q92922 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC26.12■■□□□ 1.77
SMARCC1Q92922 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
SMARCC1Q92922 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SMARCC1Q92922 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC26.12■■□□□ 1.77
SMARCC1Q92922 P4HB-223ENST00000576390 439 ntTSL 4 BASIC26.12■■□□□ 1.77
SMARCC1Q92922 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
SMARCC1Q92922 AL121906.2-201ENST00000621597 723 ntBASIC26.12■■□□□ 1.77
SMARCC1Q92922 GLDC-219ENST00000640208 420 ntTSL 2 BASIC26.12■■□□□ 1.77
SMARCC1Q92922 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
SMARCC1Q92922 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SMARCC1Q92922 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SMARCC1Q92922 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SMARCC1Q92922 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
SMARCC1Q92922 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
SMARCC1Q92922 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SMARCC1Q92922 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC26.11■■□□□ 1.77
SMARCC1Q92922 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC26.11■■□□□ 1.77
SMARCC1Q92922 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SMARCC1Q92922 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SMARCC1Q92922 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
SMARCC1Q92922 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
SMARCC1Q92922 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SMARCC1Q92922 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SMARCC1Q92922 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
SMARCC1Q92922 UNC93B2-201ENST00000285383 730 ntBASIC26.1■■□□□ 1.77
SMARCC1Q92922 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC26.1■■□□□ 1.77
SMARCC1Q92922 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SMARCC1Q92922 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC26.1■■□□□ 1.77
SMARCC1Q92922 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SMARCC1Q92922 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC26.1■■□□□ 1.77
SMARCC1Q92922 AC004264.1-201ENST00000608354 794 ntBASIC26.1■■□□□ 1.77
SMARCC1Q92922 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC26.1■■□□□ 1.77
SMARCC1Q92922 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SMARCC1Q92922 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SMARCC1Q92922 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC26.1■■□□□ 1.77
SMARCC1Q92922 AC079598.2-202ENST00000546624 1451 ntBASIC26.1■■□□□ 1.77
SMARCC1Q92922 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC26.1■■□□□ 1.77
SMARCC1Q92922 AC124283.5-201ENST00000624661 1809 ntBASIC26.09■■□□□ 1.77
SMARCC1Q92922 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SMARCC1Q92922 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SMARCC1Q92922 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SMARCC1Q92922 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SMARCC1Q92922 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC26.09■■□□□ 1.77
SMARCC1Q92922 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms