Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.19■□□□□ 0.82
RAB3IL1Q8TBN0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB3IL1Q8TBN0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.19■□□□□ 0.82
RAB3IL1Q8TBN0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.19■□□□□ 0.82
RAB3IL1Q8TBN0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.19■□□□□ 0.82
RAB3IL1Q8TBN0 AC131281.2-201ENST00000520478 145 ntBASIC20.19■□□□□ 0.82
RAB3IL1Q8TBN0 IGHV3-19-201ENST00000521488 291 ntBASIC20.19■□□□□ 0.82
RAB3IL1Q8TBN0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.19■□□□□ 0.82
RAB3IL1Q8TBN0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB3IL1Q8TBN0 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB3IL1Q8TBN0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB3IL1Q8TBN0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAB3IL1Q8TBN0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB3IL1Q8TBN0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB3IL1Q8TBN0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.19■□□□□ 0.82
RAB3IL1Q8TBN0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB3IL1Q8TBN0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.19■□□□□ 0.82
RAB3IL1Q8TBN0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAB3IL1Q8TBN0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB3IL1Q8TBN0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB3IL1Q8TBN0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RAB3IL1Q8TBN0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB3IL1Q8TBN0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
RAB3IL1Q8TBN0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
RAB3IL1Q8TBN0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAB3IL1Q8TBN0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RAB3IL1Q8TBN0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB3IL1Q8TBN0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RAB3IL1Q8TBN0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB3IL1Q8TBN0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB3IL1Q8TBN0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAB3IL1Q8TBN0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAB3IL1Q8TBN0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAB3IL1Q8TBN0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.18■□□□□ 0.82
RAB3IL1Q8TBN0 MIR4466-201ENST00000606121 54 ntBASIC20.18■□□□□ 0.82
RAB3IL1Q8TBN0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB3IL1Q8TBN0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAB3IL1Q8TBN0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB3IL1Q8TBN0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB3IL1Q8TBN0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAB3IL1Q8TBN0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB3IL1Q8TBN0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RAB3IL1Q8TBN0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.18■□□□□ 0.82
RAB3IL1Q8TBN0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.18■□□□□ 0.82
RAB3IL1Q8TBN0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB3IL1Q8TBN0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB3IL1Q8TBN0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB3IL1Q8TBN0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB3IL1Q8TBN0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
RAB3IL1Q8TBN0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RAB3IL1Q8TBN0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.17■□□□□ 0.82
RAB3IL1Q8TBN0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.17■□□□□ 0.82
RAB3IL1Q8TBN0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RAB3IL1Q8TBN0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB3IL1Q8TBN0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB3IL1Q8TBN0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RAB3IL1Q8TBN0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RAB3IL1Q8TBN0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB3IL1Q8TBN0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.16■□□□□ 0.82
RAB3IL1Q8TBN0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.16■□□□□ 0.82
RAB3IL1Q8TBN0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.16■□□□□ 0.82
RAB3IL1Q8TBN0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
RAB3IL1Q8TBN0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB3IL1Q8TBN0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RAB3IL1Q8TBN0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB3IL1Q8TBN0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB3IL1Q8TBN0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.16■□□□□ 0.82
RAB3IL1Q8TBN0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.16■□□□□ 0.82
RAB3IL1Q8TBN0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB3IL1Q8TBN0 AC233992.3-201ENST00000607491 485 ntBASIC20.16■□□□□ 0.82
RAB3IL1Q8TBN0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.16■□□□□ 0.82
RAB3IL1Q8TBN0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.16■□□□□ 0.82
RAB3IL1Q8TBN0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
RAB3IL1Q8TBN0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB3IL1Q8TBN0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB3IL1Q8TBN0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
RAB3IL1Q8TBN0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB3IL1Q8TBN0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB3IL1Q8TBN0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB3IL1Q8TBN0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB3IL1Q8TBN0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB3IL1Q8TBN0 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB3IL1Q8TBN0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB3IL1Q8TBN0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB3IL1Q8TBN0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.15■□□□□ 0.82
RAB3IL1Q8TBN0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB3IL1Q8TBN0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB3IL1Q8TBN0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB3IL1Q8TBN0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB3IL1Q8TBN0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RAB3IL1Q8TBN0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB3IL1Q8TBN0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB3IL1Q8TBN0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB3IL1Q8TBN0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB3IL1Q8TBN0 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB3IL1Q8TBN0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB3IL1Q8TBN0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RAB3IL1Q8TBN0 AC116562.4-201ENST00000641316 2276 ntBASIC20.14■□□□□ 0.81
RAB3IL1Q8TBN0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB3IL1Q8TBN0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms