Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
RTL9Q8NET4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RTL9Q8NET4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC25.14■■□□□ 1.61
RTL9Q8NET4 GXYLT1P3-201ENST00000453058 1193 ntBASIC25.14■■□□□ 1.61
RTL9Q8NET4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
RTL9Q8NET4 HES2-206ENST00000489730 730 ntTSL 2 BASIC25.14■■□□□ 1.61
RTL9Q8NET4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
RTL9Q8NET4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RTL9Q8NET4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RTL9Q8NET4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
RTL9Q8NET4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RTL9Q8NET4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC25.13■■□□□ 1.61
RTL9Q8NET4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RTL9Q8NET4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
RTL9Q8NET4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RTL9Q8NET4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC25.13■■□□□ 1.61
RTL9Q8NET4 AL390719.1-204ENST00000412397 1219 ntBASIC25.13■■□□□ 1.61
RTL9Q8NET4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC25.13■■□□□ 1.61
RTL9Q8NET4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RTL9Q8NET4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC25.13■■□□□ 1.61
RTL9Q8NET4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RTL9Q8NET4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RTL9Q8NET4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RTL9Q8NET4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RTL9Q8NET4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
RTL9Q8NET4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC25.12■■□□□ 1.61
RTL9Q8NET4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC25.12■■□□□ 1.61
RTL9Q8NET4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
RTL9Q8NET4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC25.12■■□□□ 1.61
RTL9Q8NET4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RTL9Q8NET4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RTL9Q8NET4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
RTL9Q8NET4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RTL9Q8NET4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC25.12■■□□□ 1.61
RTL9Q8NET4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC25.12■■□□□ 1.61
RTL9Q8NET4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC25.12■■□□□ 1.61
RTL9Q8NET4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC25.12■■□□□ 1.61
RTL9Q8NET4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RTL9Q8NET4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC25.12■■□□□ 1.61
RTL9Q8NET4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
RTL9Q8NET4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
RTL9Q8NET4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
RTL9Q8NET4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC25.12■■□□□ 1.61
RTL9Q8NET4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC25.12■■□□□ 1.61
RTL9Q8NET4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC25.11■■□□□ 1.61
RTL9Q8NET4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RTL9Q8NET4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC25.11■■□□□ 1.61
RTL9Q8NET4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RTL9Q8NET4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RTL9Q8NET4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RTL9Q8NET4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC25.11■■□□□ 1.61
RTL9Q8NET4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC25.11■■□□□ 1.61
RTL9Q8NET4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC25.11■■□□□ 1.61
RTL9Q8NET4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC25.11■■□□□ 1.61
RTL9Q8NET4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RTL9Q8NET4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC25.11■■□□□ 1.61
RTL9Q8NET4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
RTL9Q8NET4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC25.11■■□□□ 1.61
RTL9Q8NET4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RTL9Q8NET4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC25.11■■□□□ 1.61
RTL9Q8NET4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
RTL9Q8NET4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
RTL9Q8NET4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RTL9Q8NET4 AC012618.2-201ENST00000428058 849 ntBASIC25.1■■□□□ 1.61
RTL9Q8NET4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RTL9Q8NET4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC25.1■■□□□ 1.61
RTL9Q8NET4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
RTL9Q8NET4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RTL9Q8NET4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC25.1■■□□□ 1.61
RTL9Q8NET4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
RTL9Q8NET4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RTL9Q8NET4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RTL9Q8NET4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RTL9Q8NET4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RTL9Q8NET4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC25.1■■□□□ 1.61
RTL9Q8NET4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
RTL9Q8NET4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RTL9Q8NET4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RTL9Q8NET4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RTL9Q8NET4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RTL9Q8NET4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC25.09■■□□□ 1.61
RTL9Q8NET4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RTL9Q8NET4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
RTL9Q8NET4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
RTL9Q8NET4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC25.09■■□□□ 1.61
RTL9Q8NET4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC25.09■■□□□ 1.61
RTL9Q8NET4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
RTL9Q8NET4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RTL9Q8NET4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RTL9Q8NET4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RTL9Q8NET4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC25.09■■□□□ 1.61
RTL9Q8NET4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RTL9Q8NET4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RTL9Q8NET4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
RTL9Q8NET4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
RTL9Q8NET4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
RTL9Q8NET4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
RTL9Q8NET4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RTL9Q8NET4 AC239809.2-201ENST00000415381 517 ntBASIC25.08■■□□□ 1.61
RTL9Q8NET4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms