Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIPK4Q8NE63 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.66■□□□□ 0.74
HIPK4Q8NE63 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIPK4Q8NE63 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.66■□□□□ 0.74
HIPK4Q8NE63 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIPK4Q8NE63 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HIPK4Q8NE63 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.65■□□□□ 0.74
HIPK4Q8NE63 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIPK4Q8NE63 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HIPK4Q8NE63 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HIPK4Q8NE63 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIPK4Q8NE63 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.65■□□□□ 0.74
HIPK4Q8NE63 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HIPK4Q8NE63 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIPK4Q8NE63 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
HIPK4Q8NE63 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIPK4Q8NE63 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIPK4Q8NE63 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.65■□□□□ 0.74
HIPK4Q8NE63 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.65■□□□□ 0.74
HIPK4Q8NE63 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HIPK4Q8NE63 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIPK4Q8NE63 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIPK4Q8NE63 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIPK4Q8NE63 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIPK4Q8NE63 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.65■□□□□ 0.74
HIPK4Q8NE63 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HIPK4Q8NE63 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HIPK4Q8NE63 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HIPK4Q8NE63 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIPK4Q8NE63 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIPK4Q8NE63 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HIPK4Q8NE63 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.64■□□□□ 0.74
HIPK4Q8NE63 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
HIPK4Q8NE63 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.64■□□□□ 0.74
HIPK4Q8NE63 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.64■□□□□ 0.74
HIPK4Q8NE63 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HIPK4Q8NE63 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIPK4Q8NE63 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIPK4Q8NE63 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIPK4Q8NE63 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIPK4Q8NE63 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.64■□□□□ 0.73
HIPK4Q8NE63 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
HIPK4Q8NE63 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HIPK4Q8NE63 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HIPK4Q8NE63 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.64■□□□□ 0.73
HIPK4Q8NE63 AC233992.3-201ENST00000607491 485 ntBASIC19.64■□□□□ 0.73
HIPK4Q8NE63 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIPK4Q8NE63 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIPK4Q8NE63 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HIPK4Q8NE63 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
HIPK4Q8NE63 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
HIPK4Q8NE63 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIPK4Q8NE63 BX323043.1-201ENST00000641006 1765 ntBASIC19.64■□□□□ 0.73
HIPK4Q8NE63 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.64■□□□□ 0.73
HIPK4Q8NE63 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HIPK4Q8NE63 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
HIPK4Q8NE63 TCF3P1-201ENST00000423021 1937 ntBASIC19.64■□□□□ 0.73
HIPK4Q8NE63 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.64■□□□□ 0.73
HIPK4Q8NE63 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIPK4Q8NE63 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HIPK4Q8NE63 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK4Q8NE63 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK4Q8NE63 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK4Q8NE63 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK4Q8NE63 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HIPK4Q8NE63 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK4Q8NE63 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK4Q8NE63 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK4Q8NE63 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.63■□□□□ 0.73
HIPK4Q8NE63 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK4Q8NE63 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK4Q8NE63 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK4Q8NE63 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK4Q8NE63 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK4Q8NE63 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK4Q8NE63 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK4Q8NE63 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK4Q8NE63 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK4Q8NE63 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK4Q8NE63 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
HIPK4Q8NE63 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK4Q8NE63 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK4Q8NE63 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HIPK4Q8NE63 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK4Q8NE63 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK4Q8NE63 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIPK4Q8NE63 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
HIPK4Q8NE63 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIPK4Q8NE63 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIPK4Q8NE63 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HIPK4Q8NE63 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIPK4Q8NE63 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIPK4Q8NE63 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HIPK4Q8NE63 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
HIPK4Q8NE63 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HIPK4Q8NE63 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIPK4Q8NE63 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIPK4Q8NE63 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
HIPK4Q8NE63 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
HIPK4Q8NE63 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms