Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.79■□□□□ 0.28
ZNF439Q8NDP4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.79■□□□□ 0.28
ZNF439Q8NDP4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.79■□□□□ 0.28
ZNF439Q8NDP4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ZNF439Q8NDP4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ZNF439Q8NDP4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF439Q8NDP4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.79■□□□□ 0.28
ZNF439Q8NDP4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF439Q8NDP4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF439Q8NDP4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
ZNF439Q8NDP4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ZNF439Q8NDP4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF439Q8NDP4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ZNF439Q8NDP4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.79■□□□□ 0.28
ZNF439Q8NDP4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 AC007322.3-201ENST00000426526 701 ntBASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 KRT18P11-201ENST00000435214 1283 ntBASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 AC010536.3-201ENST00000620306 533 ntBASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 AC020907.5-201ENST00000624372 1936 ntBASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
ZNF439Q8NDP4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF439Q8NDP4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF439Q8NDP4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.77■□□□□ 0.28
ZNF439Q8NDP4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.77■□□□□ 0.28
ZNF439Q8NDP4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF439Q8NDP4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.77■□□□□ 0.28
ZNF439Q8NDP4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ZNF439Q8NDP4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.77■□□□□ 0.28
ZNF439Q8NDP4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
ZNF439Q8NDP4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF439Q8NDP4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF439Q8NDP4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF439Q8NDP4 TERF1P5-201ENST00000477545 1207 ntBASIC16.77■□□□□ 0.28
ZNF439Q8NDP4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.77■□□□□ 0.28
ZNF439Q8NDP4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF439Q8NDP4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF439Q8NDP4 MIR2861-201ENST00000636310 90 ntBASIC16.77■□□□□ 0.28
ZNF439Q8NDP4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF439Q8NDP4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ZNF439Q8NDP4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF439Q8NDP4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF439Q8NDP4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF439Q8NDP4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ZNF439Q8NDP4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ZNF439Q8NDP4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ZNF439Q8NDP4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
ZNF439Q8NDP4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
ZNF439Q8NDP4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ZNF439Q8NDP4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.77■□□□□ 0.27
ZNF439Q8NDP4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
ZNF439Q8NDP4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
ZNF439Q8NDP4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
ZNF439Q8NDP4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ZNF439Q8NDP4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ZNF439Q8NDP4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ZNF439Q8NDP4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ZNF439Q8NDP4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ZNF439Q8NDP4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.77■□□□□ 0.27
ZNF439Q8NDP4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.77■□□□□ 0.27
ZNF439Q8NDP4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
ZNF439Q8NDP4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.77■□□□□ 0.27
ZNF439Q8NDP4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.76■□□□□ 0.27
ZNF439Q8NDP4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.76■□□□□ 0.27
ZNF439Q8NDP4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.76■□□□□ 0.27
ZNF439Q8NDP4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.76■□□□□ 0.27
ZNF439Q8NDP4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ZNF439Q8NDP4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF439Q8NDP4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF439Q8NDP4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.76■□□□□ 0.27
ZNF439Q8NDP4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF439Q8NDP4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.76■□□□□ 0.27
ZNF439Q8NDP4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
ZNF439Q8NDP4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF439Q8NDP4 AC137761.2-201ENST00000561729 223 ntBASIC16.76■□□□□ 0.27
ZNF439Q8NDP4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms