Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
HMCN2Q8NDA2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC11.52□□□□□ -0.57
HMCN2Q8NDA2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
HMCN2Q8NDA2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC11.52□□□□□ -0.57
HMCN2Q8NDA2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
HMCN2Q8NDA2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
HMCN2Q8NDA2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
HMCN2Q8NDA2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
HMCN2Q8NDA2 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
HMCN2Q8NDA2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
HMCN2Q8NDA2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
HMCN2Q8NDA2 EMBP1-201ENST00000458200 901 ntBASIC11.52□□□□□ -0.57
HMCN2Q8NDA2 MIR3180-1-201ENST00000580374 94 ntBASIC11.52□□□□□ -0.57
HMCN2Q8NDA2 MIR3180-3-201ENST00000584616 94 ntBASIC11.52□□□□□ -0.57
HMCN2Q8NDA2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
HMCN2Q8NDA2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
HMCN2Q8NDA2 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
HMCN2Q8NDA2 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
HMCN2Q8NDA2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC11.51□□□□□ -0.57
HMCN2Q8NDA2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HMCN2Q8NDA2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC11.51□□□□□ -0.57
HMCN2Q8NDA2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC11.51□□□□□ -0.57
HMCN2Q8NDA2 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC11.51□□□□□ -0.57
HMCN2Q8NDA2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC11.51□□□□□ -0.57
HMCN2Q8NDA2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HMCN2Q8NDA2 HMGA1P5-201ENST00000412453 271 ntBASIC11.51□□□□□ -0.57
HMCN2Q8NDA2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC11.51□□□□□ -0.57
HMCN2Q8NDA2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HMCN2Q8NDA2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HMCN2Q8NDA2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC11.51□□□□□ -0.57
HMCN2Q8NDA2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC11.51□□□□□ -0.57
HMCN2Q8NDA2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC11.51□□□□□ -0.57
HMCN2Q8NDA2 AP002469.2-201ENST00000531724 424 ntBASIC11.51□□□□□ -0.57
HMCN2Q8NDA2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC11.51□□□□□ -0.57
HMCN2Q8NDA2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC11.51□□□□□ -0.57
HMCN2Q8NDA2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
HMCN2Q8NDA2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC11.51□□□□□ -0.57
HMCN2Q8NDA2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC11.51□□□□□ -0.57
HMCN2Q8NDA2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
HMCN2Q8NDA2 AC069148.1-201ENST00000608741 768 ntBASIC11.51□□□□□ -0.57
HMCN2Q8NDA2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HMCN2Q8NDA2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
HMCN2Q8NDA2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HMCN2Q8NDA2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
HMCN2Q8NDA2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HMCN2Q8NDA2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC11.5□□□□□ -0.57
HMCN2Q8NDA2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HMCN2Q8NDA2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HMCN2Q8NDA2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HMCN2Q8NDA2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
HMCN2Q8NDA2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
HMCN2Q8NDA2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
HMCN2Q8NDA2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HMCN2Q8NDA2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC11.5□□□□□ -0.57
HMCN2Q8NDA2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HMCN2Q8NDA2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HMCN2Q8NDA2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HMCN2Q8NDA2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC11.5□□□□□ -0.57
HMCN2Q8NDA2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
HMCN2Q8NDA2 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
HMCN2Q8NDA2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
HMCN2Q8NDA2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HMCN2Q8NDA2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC11.5□□□□□ -0.57
HMCN2Q8NDA2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HMCN2Q8NDA2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
HMCN2Q8NDA2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HMCN2Q8NDA2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HMCN2Q8NDA2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
HMCN2Q8NDA2 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
HMCN2Q8NDA2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 CR392000.1-201ENST00000624770 1228 ntBASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 B3GAT3P1-201ENST00000471720 806 ntBASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
HMCN2Q8NDA2 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms