Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RETREG2Q8NC44 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
RETREG2Q8NC44 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
RETREG2Q8NC44 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RETREG2Q8NC44 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.98■■□□□ 1.27
RETREG2Q8NC44 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RETREG2Q8NC44 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RETREG2Q8NC44 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RETREG2Q8NC44 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RETREG2Q8NC44 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RETREG2Q8NC44 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RETREG2Q8NC44 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.98■■□□□ 1.27
RETREG2Q8NC44 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RETREG2Q8NC44 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
RETREG2Q8NC44 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC22.98■■□□□ 1.27
RETREG2Q8NC44 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.98■■□□□ 1.27
RETREG2Q8NC44 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RETREG2Q8NC44 AL359736.2-201ENST00000621992 437 ntBASIC22.98■■□□□ 1.27
RETREG2Q8NC44 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
RETREG2Q8NC44 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
RETREG2Q8NC44 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RETREG2Q8NC44 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RETREG2Q8NC44 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RETREG2Q8NC44 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RETREG2Q8NC44 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RETREG2Q8NC44 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.97■■□□□ 1.27
RETREG2Q8NC44 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RETREG2Q8NC44 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC22.97■■□□□ 1.27
RETREG2Q8NC44 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.97■■□□□ 1.27
RETREG2Q8NC44 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
RETREG2Q8NC44 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC22.97■■□□□ 1.27
RETREG2Q8NC44 AC007322.3-201ENST00000426526 701 ntBASIC22.97■■□□□ 1.27
RETREG2Q8NC44 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
RETREG2Q8NC44 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RETREG2Q8NC44 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.97■■□□□ 1.27
RETREG2Q8NC44 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RETREG2Q8NC44 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC22.97■■□□□ 1.27
RETREG2Q8NC44 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC22.97■■□□□ 1.27
RETREG2Q8NC44 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
RETREG2Q8NC44 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
RETREG2Q8NC44 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.97■■□□□ 1.27
RETREG2Q8NC44 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
RETREG2Q8NC44 AC073130.3-201ENST00000624389 2278 ntBASIC22.97■■□□□ 1.27
RETREG2Q8NC44 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RETREG2Q8NC44 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RETREG2Q8NC44 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.96■■□□□ 1.27
RETREG2Q8NC44 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
RETREG2Q8NC44 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
RETREG2Q8NC44 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RETREG2Q8NC44 SLC25A24-204ENST00000569674 2357 ntBASIC22.96■■□□□ 1.27
RETREG2Q8NC44 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
RETREG2Q8NC44 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.96■■□□□ 1.27
RETREG2Q8NC44 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RETREG2Q8NC44 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC22.96■■□□□ 1.27
RETREG2Q8NC44 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
RETREG2Q8NC44 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
RETREG2Q8NC44 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.96■■□□□ 1.27
RETREG2Q8NC44 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
RETREG2Q8NC44 AC008403.3-201ENST00000598924 454 ntBASIC22.96■■□□□ 1.27
RETREG2Q8NC44 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
RETREG2Q8NC44 FAM197Y4-202ENST00000622692 608 ntBASIC22.96■■□□□ 1.27
RETREG2Q8NC44 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RETREG2Q8NC44 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RETREG2Q8NC44 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RETREG2Q8NC44 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RETREG2Q8NC44 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RETREG2Q8NC44 MIR718-201ENST00000390190 70 ntBASIC22.95■■□□□ 1.26
RETREG2Q8NC44 MCRIP2P1-201ENST00000394346 511 ntBASIC22.95■■□□□ 1.26
RETREG2Q8NC44 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RETREG2Q8NC44 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
RETREG2Q8NC44 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RETREG2Q8NC44 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RETREG2Q8NC44 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC22.95■■□□□ 1.26
RETREG2Q8NC44 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RETREG2Q8NC44 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
RETREG2Q8NC44 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.95■■□□□ 1.26
RETREG2Q8NC44 AL157384.1-201ENST00000445995 2473 ntBASIC22.94■■□□□ 1.26
RETREG2Q8NC44 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
RETREG2Q8NC44 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
RETREG2Q8NC44 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RETREG2Q8NC44 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RETREG2Q8NC44 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.94■■□□□ 1.26
RETREG2Q8NC44 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RETREG2Q8NC44 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC22.94■■□□□ 1.26
RETREG2Q8NC44 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RETREG2Q8NC44 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
RETREG2Q8NC44 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.94■■□□□ 1.26
RETREG2Q8NC44 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC22.94■■□□□ 1.26
RETREG2Q8NC44 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RETREG2Q8NC44 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.94■■□□□ 1.26
RETREG2Q8NC44 KRT17P3-201ENST00000420566 1262 ntBASIC22.94■■□□□ 1.26
RETREG2Q8NC44 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC22.94■■□□□ 1.26
RETREG2Q8NC44 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.94■■□□□ 1.26
RETREG2Q8NC44 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC22.94■■□□□ 1.26
RETREG2Q8NC44 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC22.94■■□□□ 1.26
RETREG2Q8NC44 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
RETREG2Q8NC44 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
RETREG2Q8NC44 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RETREG2Q8NC44 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RETREG2Q8NC44 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms