Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC89Q8N998 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC89Q8N998 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC89Q8N998 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CCDC89Q8N998 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CCDC89Q8N998 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC89Q8N998 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC89Q8N998 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC89Q8N998 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CCDC89Q8N998 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC89Q8N998 CCDC92B-201ENST00000575506 885 ntBASIC21.03■□□□□ 0.96
CCDC89Q8N998 TERF1P2-201ENST00000583350 1212 ntBASIC21.03■□□□□ 0.96
CCDC89Q8N998 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC89Q8N998 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC89Q8N998 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
CCDC89Q8N998 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC89Q8N998 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CCDC89Q8N998 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC89Q8N998 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC89Q8N998 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC89Q8N998 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC89Q8N998 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC89Q8N998 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC89Q8N998 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC89Q8N998 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC89Q8N998 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC89Q8N998 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC89Q8N998 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CCDC89Q8N998 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC89Q8N998 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC89Q8N998 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CCDC89Q8N998 TCF3P1-201ENST00000423021 1937 ntBASIC21.02■□□□□ 0.95
CCDC89Q8N998 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCDC89Q8N998 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC89Q8N998 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC89Q8N998 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CCDC89Q8N998 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.01■□□□□ 0.95
CCDC89Q8N998 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC89Q8N998 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.01■□□□□ 0.95
CCDC89Q8N998 KRT18P20-201ENST00000548986 1279 ntBASIC21.01■□□□□ 0.95
CCDC89Q8N998 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.01■□□□□ 0.95
CCDC89Q8N998 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC89Q8N998 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC89Q8N998 MIR2861-201ENST00000636310 90 ntBASIC21.01■□□□□ 0.95
CCDC89Q8N998 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
CCDC89Q8N998 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC89Q8N998 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC89Q8N998 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC89Q8N998 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC89Q8N998 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC89Q8N998 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CCDC89Q8N998 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21■□□□□ 0.95
CCDC89Q8N998 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21■□□□□ 0.95
CCDC89Q8N998 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21■□□□□ 0.95
CCDC89Q8N998 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC89Q8N998 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC89Q8N998 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC89Q8N998 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21■□□□□ 0.95
CCDC89Q8N998 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21■□□□□ 0.95
CCDC89Q8N998 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21■□□□□ 0.95
CCDC89Q8N998 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21■□□□□ 0.95
CCDC89Q8N998 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC89Q8N998 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21■□□□□ 0.95
CCDC89Q8N998 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21■□□□□ 0.95
CCDC89Q8N998 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21■□□□□ 0.95
CCDC89Q8N998 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC89Q8N998 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC89Q8N998 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CCDC89Q8N998 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC89Q8N998 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CCDC89Q8N998 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC89Q8N998 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC89Q8N998 KRT18P14-201ENST00000534205 1250 ntBASIC20.99■□□□□ 0.95
CCDC89Q8N998 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC89Q8N998 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC89Q8N998 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC89Q8N998 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC89Q8N998 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC89Q8N998 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC89Q8N998 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC89Q8N998 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC89Q8N998 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC89Q8N998 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC89Q8N998 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CCDC89Q8N998 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC89Q8N998 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC89Q8N998 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC89Q8N998 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC89Q8N998 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC89Q8N998 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC89Q8N998 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC89Q8N998 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
CCDC89Q8N998 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CCDC89Q8N998 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC89Q8N998 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC89Q8N998 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC89Q8N998 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC89Q8N998 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.98■□□□□ 0.95
CCDC89Q8N998 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CCDC89Q8N998 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms