Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.18■□□□□ 0.98
SCML4Q8N228 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCML4Q8N228 AC023632.3-201ENST00000521633 145 ntBASIC21.18■□□□□ 0.98
SCML4Q8N228 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.18■□□□□ 0.98
SCML4Q8N228 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.18■□□□□ 0.98
SCML4Q8N228 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCML4Q8N228 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCML4Q8N228 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.18■□□□□ 0.98
SCML4Q8N228 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCML4Q8N228 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCML4Q8N228 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SCML4Q8N228 AC092720.2-201ENST00000602388 1665 ntBASIC21.18■□□□□ 0.98
SCML4Q8N228 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCML4Q8N228 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCML4Q8N228 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SCML4Q8N228 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SCML4Q8N228 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCML4Q8N228 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.17■□□□□ 0.98
SCML4Q8N228 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
SCML4Q8N228 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SCML4Q8N228 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCML4Q8N228 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCML4Q8N228 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCML4Q8N228 PTBP1P-201ENST00000554374 1601 ntBASIC21.16■□□□□ 0.98
SCML4Q8N228 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SCML4Q8N228 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SCML4Q8N228 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCML4Q8N228 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SCML4Q8N228 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCML4Q8N228 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.16■□□□□ 0.98
SCML4Q8N228 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.16■□□□□ 0.98
SCML4Q8N228 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCML4Q8N228 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.16■□□□□ 0.98
SCML4Q8N228 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.16■□□□□ 0.98
SCML4Q8N228 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCML4Q8N228 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SCML4Q8N228 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SCML4Q8N228 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCML4Q8N228 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SCML4Q8N228 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.16■□□□□ 0.98
SCML4Q8N228 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
SCML4Q8N228 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
SCML4Q8N228 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.15■□□□□ 0.98
SCML4Q8N228 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCML4Q8N228 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCML4Q8N228 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCML4Q8N228 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCML4Q8N228 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.15■□□□□ 0.98
SCML4Q8N228 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCML4Q8N228 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCML4Q8N228 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCML4Q8N228 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCML4Q8N228 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.15■□□□□ 0.98
SCML4Q8N228 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.15■□□□□ 0.98
SCML4Q8N228 CD99P1-205ENST00000527459 561 ntBASIC21.15■□□□□ 0.98
SCML4Q8N228 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.15■□□□□ 0.98
SCML4Q8N228 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCML4Q8N228 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCML4Q8N228 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.15■□□□□ 0.98
SCML4Q8N228 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.14■□□□□ 0.98
SCML4Q8N228 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.14■□□□□ 0.98
SCML4Q8N228 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SCML4Q8N228 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCML4Q8N228 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SCML4Q8N228 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCML4Q8N228 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.14■□□□□ 0.97
SCML4Q8N228 UNC93B5-201ENST00000530315 699 ntBASIC21.14■□□□□ 0.97
SCML4Q8N228 PNMA6B-201ENST00000538162 1200 ntBASIC21.14■□□□□ 0.97
SCML4Q8N228 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.14■□□□□ 0.97
SCML4Q8N228 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SCML4Q8N228 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCML4Q8N228 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.14■□□□□ 0.97
SCML4Q8N228 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.14■□□□□ 0.97
SCML4Q8N228 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SCML4Q8N228 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCML4Q8N228 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SCML4Q8N228 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCML4Q8N228 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCML4Q8N228 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCML4Q8N228 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.13■□□□□ 0.97
SCML4Q8N228 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCML4Q8N228 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.13■□□□□ 0.97
SCML4Q8N228 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.13■□□□□ 0.97
SCML4Q8N228 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCML4Q8N228 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCML4Q8N228 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCML4Q8N228 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.13■□□□□ 0.97
SCML4Q8N228 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.13■□□□□ 0.97
SCML4Q8N228 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.13■□□□□ 0.97
SCML4Q8N228 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.13■□□□□ 0.97
SCML4Q8N228 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.13■□□□□ 0.97
SCML4Q8N228 AC005829.2-201ENST00000571422 1056 ntBASIC21.13■□□□□ 0.97
SCML4Q8N228 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCML4Q8N228 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.13■□□□□ 0.97
SCML4Q8N228 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCML4Q8N228 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCML4Q8N228 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCML4Q8N228 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCML4Q8N228 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCML4Q8N228 AC092368.3-202ENST00000574180 1591 ntBASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms