Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL27A1Q8IZC6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.34■□□□□ 0.69
COL27A1Q8IZC6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL27A1Q8IZC6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL27A1Q8IZC6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.34■□□□□ 0.69
COL27A1Q8IZC6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.34■□□□□ 0.69
COL27A1Q8IZC6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.34■□□□□ 0.69
COL27A1Q8IZC6 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
COL27A1Q8IZC6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
COL27A1Q8IZC6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL27A1Q8IZC6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL27A1Q8IZC6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.33■□□□□ 0.69
COL27A1Q8IZC6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL27A1Q8IZC6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.33■□□□□ 0.69
COL27A1Q8IZC6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL27A1Q8IZC6 AL445228.2-201ENST00000605589 952 ntBASIC19.33■□□□□ 0.69
COL27A1Q8IZC6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.33■□□□□ 0.69
COL27A1Q8IZC6 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
COL27A1Q8IZC6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.33■□□□□ 0.69
COL27A1Q8IZC6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.33■□□□□ 0.68
COL27A1Q8IZC6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.33■□□□□ 0.68
COL27A1Q8IZC6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.33■□□□□ 0.68
COL27A1Q8IZC6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
COL27A1Q8IZC6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COL27A1Q8IZC6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.33■□□□□ 0.68
COL27A1Q8IZC6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COL27A1Q8IZC6 AP003071.4-201ENST00000562276 1284 ntBASIC19.33■□□□□ 0.68
COL27A1Q8IZC6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.33■□□□□ 0.68
COL27A1Q8IZC6 AC026471.5-201ENST00000615068 467 ntBASIC19.33■□□□□ 0.68
COL27A1Q8IZC6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.33■□□□□ 0.68
COL27A1Q8IZC6 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL27A1Q8IZC6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL27A1Q8IZC6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.32■□□□□ 0.68
COL27A1Q8IZC6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL27A1Q8IZC6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.32■□□□□ 0.68
COL27A1Q8IZC6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL27A1Q8IZC6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL27A1Q8IZC6 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL27A1Q8IZC6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.32■□□□□ 0.68
COL27A1Q8IZC6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.32■□□□□ 0.68
COL27A1Q8IZC6 AF186192.3-201ENST00000583427 947 ntBASIC19.32■□□□□ 0.68
COL27A1Q8IZC6 REXO1L10P-201ENST00000615707 1290 ntBASIC19.32■□□□□ 0.68
COL27A1Q8IZC6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.32■□□□□ 0.68
COL27A1Q8IZC6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL27A1Q8IZC6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
COL27A1Q8IZC6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL27A1Q8IZC6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.32■□□□□ 0.68
COL27A1Q8IZC6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL27A1Q8IZC6 ECEL1P1-201ENST00000373592 1742 ntBASIC19.32■□□□□ 0.68
COL27A1Q8IZC6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL27A1Q8IZC6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.31■□□□□ 0.68
COL27A1Q8IZC6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.31■□□□□ 0.68
COL27A1Q8IZC6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
COL27A1Q8IZC6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.31■□□□□ 0.68
COL27A1Q8IZC6 MIR6786-201ENST00000616843 113 ntBASIC19.31■□□□□ 0.68
COL27A1Q8IZC6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL27A1Q8IZC6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL27A1Q8IZC6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
COL27A1Q8IZC6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.31■□□□□ 0.68
COL27A1Q8IZC6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
COL27A1Q8IZC6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL27A1Q8IZC6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL27A1Q8IZC6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL27A1Q8IZC6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
COL27A1Q8IZC6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.31■□□□□ 0.68
COL27A1Q8IZC6 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL27A1Q8IZC6 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.3■□□□□ 0.68
COL27A1Q8IZC6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
COL27A1Q8IZC6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.3■□□□□ 0.68
COL27A1Q8IZC6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL27A1Q8IZC6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL27A1Q8IZC6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL27A1Q8IZC6 KRT8P36-201ENST00000489121 1440 ntBASIC19.3■□□□□ 0.68
COL27A1Q8IZC6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
COL27A1Q8IZC6 AC023632.3-201ENST00000521633 145 ntBASIC19.3■□□□□ 0.68
COL27A1Q8IZC6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
COL27A1Q8IZC6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
COL27A1Q8IZC6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.3■□□□□ 0.68
COL27A1Q8IZC6 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.29■□□□□ 0.68
COL27A1Q8IZC6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL27A1Q8IZC6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL27A1Q8IZC6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
COL27A1Q8IZC6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.29■□□□□ 0.68
COL27A1Q8IZC6 CD177P1-201ENST00000606252 935 ntBASIC19.29■□□□□ 0.68
COL27A1Q8IZC6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
COL27A1Q8IZC6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL27A1Q8IZC6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL27A1Q8IZC6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL27A1Q8IZC6 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
COL27A1Q8IZC6 AC233723.2-201ENST00000623798 2106 ntBASIC19.29■□□□□ 0.68
COL27A1Q8IZC6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL27A1Q8IZC6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL27A1Q8IZC6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL27A1Q8IZC6 AL353807.1-201ENST00000427475 662 ntBASIC19.28■□□□□ 0.68
COL27A1Q8IZC6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL27A1Q8IZC6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.28■□□□□ 0.68
COL27A1Q8IZC6 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.28■□□□□ 0.68
COL27A1Q8IZC6 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL27A1Q8IZC6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL27A1Q8IZC6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms