Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM48Q8IWZ4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM48Q8IWZ4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM48Q8IWZ4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM48Q8IWZ4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM48Q8IWZ4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.91■□□□□ 0.78
TRIM48Q8IWZ4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM48Q8IWZ4 MIR4651-201ENST00000582622 73 ntBASIC19.91■□□□□ 0.78
TRIM48Q8IWZ4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM48Q8IWZ4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM48Q8IWZ4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM48Q8IWZ4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.91■□□□□ 0.78
TRIM48Q8IWZ4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.91■□□□□ 0.78
TRIM48Q8IWZ4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.91■□□□□ 0.78
TRIM48Q8IWZ4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TRIM48Q8IWZ4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM48Q8IWZ4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM48Q8IWZ4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM48Q8IWZ4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM48Q8IWZ4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM48Q8IWZ4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TRIM48Q8IWZ4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM48Q8IWZ4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM48Q8IWZ4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM48Q8IWZ4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM48Q8IWZ4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM48Q8IWZ4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM48Q8IWZ4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.9■□□□□ 0.78
TRIM48Q8IWZ4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.9■□□□□ 0.78
TRIM48Q8IWZ4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.9■□□□□ 0.78
TRIM48Q8IWZ4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM48Q8IWZ4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM48Q8IWZ4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM48Q8IWZ4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM48Q8IWZ4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM48Q8IWZ4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TRIM48Q8IWZ4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.9■□□□□ 0.78
TRIM48Q8IWZ4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM48Q8IWZ4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM48Q8IWZ4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM48Q8IWZ4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TRIM48Q8IWZ4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM48Q8IWZ4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM48Q8IWZ4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM48Q8IWZ4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM48Q8IWZ4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM48Q8IWZ4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.89■□□□□ 0.78
TRIM48Q8IWZ4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM48Q8IWZ4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM48Q8IWZ4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM48Q8IWZ4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
TRIM48Q8IWZ4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.89■□□□□ 0.77
TRIM48Q8IWZ4 FEM1AP4-201ENST00000443167 1987 ntBASIC19.89■□□□□ 0.77
TRIM48Q8IWZ4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.89■□□□□ 0.77
TRIM48Q8IWZ4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM48Q8IWZ4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.89■□□□□ 0.77
TRIM48Q8IWZ4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.89■□□□□ 0.77
TRIM48Q8IWZ4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.89■□□□□ 0.77
TRIM48Q8IWZ4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM48Q8IWZ4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM48Q8IWZ4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM48Q8IWZ4 AL356652.1-201ENST00000615962 565 ntBASIC19.89■□□□□ 0.77
TRIM48Q8IWZ4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM48Q8IWZ4 AC121338.2-201ENST00000622535 1744 ntBASIC19.89■□□□□ 0.77
TRIM48Q8IWZ4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM48Q8IWZ4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM48Q8IWZ4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM48Q8IWZ4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TRIM48Q8IWZ4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM48Q8IWZ4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM48Q8IWZ4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM48Q8IWZ4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM48Q8IWZ4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TRIM48Q8IWZ4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM48Q8IWZ4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM48Q8IWZ4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM48Q8IWZ4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM48Q8IWZ4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM48Q8IWZ4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM48Q8IWZ4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.88■□□□□ 0.77
TRIM48Q8IWZ4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.88■□□□□ 0.77
TRIM48Q8IWZ4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM48Q8IWZ4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM48Q8IWZ4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.88■□□□□ 0.77
TRIM48Q8IWZ4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM48Q8IWZ4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM48Q8IWZ4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM48Q8IWZ4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM48Q8IWZ4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM48Q8IWZ4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TRIM48Q8IWZ4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM48Q8IWZ4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM48Q8IWZ4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM48Q8IWZ4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM48Q8IWZ4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.87■□□□□ 0.77
TRIM48Q8IWZ4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
TRIM48Q8IWZ4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM48Q8IWZ4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM48Q8IWZ4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM48Q8IWZ4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms